The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference ROS_Cfam_1.0

Genomic

1. NC_051814.1 Reference ROS_Cfam_1.0

   Range

   1270934..1352176

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038679069.1 → XP_038534997.1  prolow-density lipoprotein receptor-related protein 1 isoform X1

   Conserved Domains (10) summary

   smart00192
   Location:3510 → 3543

   LDLa; Low-density lipoprotein receptor domain class A

   smart00135
   Location:3111 → 3153

   LY; Low-density lipoprotein-receptor YWTD domain

   smart00179
   Location:2999 → 3028

   EGF_CA; Calcium-binding EGF-like domain

   COG3386
   Location:2270 → 2480

   YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

   cd00112
   Location:3592 → 3626

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

   pfam00057
   Location:2874 → 2908

   Ldl_recept_a; Low-density lipoprotein receptor domain class A

   pfam00058
   Location:4030 → 4070

   Ldl_recept_b; Low-density lipoprotein receptor repeat class B

   pfam12662
   Location:2979 → 3002

   cEGF; Complement Clr-like EGF-like

   pfam14670
   Location:807 → 842

   FXa_inhibition; Coagulation Factor Xa inhibitory site

   cl00104
   Location:71 → 104

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

2. XM_038679070.1 → XP_038534998.1  prolow-density lipoprotein receptor-related protein 1 isoform X2

   UniProtKB/TrEMBL

   A0A8I3N9S8

   Related

   ENSCAFP00845013914.1, ENSCAFT00845017864.1

   Conserved Domains (10) summary

   smart00192
   Location:3493 → 3526

   LDLa; Low-density lipoprotein receptor domain class A

   smart00135
   Location:3094 → 3136

   LY; Low-density lipoprotein-receptor YWTD domain

   smart00179
   Location:2982 → 3011

   EGF_CA; Calcium-binding EGF-like domain

   COG3386
   Location:2253 → 2463

   YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

   cd00112
   Location:3575 → 3609

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

   pfam00057
   Location:2857 → 2891

   Ldl_recept_a; Low-density lipoprotein receptor domain class A

   pfam00058
   Location:4013 → 4053

   Ldl_recept_b; Low-density lipoprotein receptor repeat class B

   pfam12662
   Location:2962 → 2985

   cEGF; Complement Clr-like EGF-like

   pfam14670
   Location:807 → 842

   FXa_inhibition; Coagulation Factor Xa inhibitory site

   cl00104
   Location:71 → 104

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

Alternate UMICH_Zoey_3.1

Genomic

1. NC_049270.1 Alternate UMICH_Zoey_3.1

   Range

   1247639..1328819

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038487853.1 → XP_038343781.1  prolow-density lipoprotein receptor-related protein 1 isoform X1

2. XM_038487854.1 → XP_038343782.1  prolow-density lipoprotein receptor-related protein 1 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

   Range

   1489631..1570787

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038613707.1 → XP_038469635.1  prolow-density lipoprotein receptor-related protein 1 isoform X1

2. XM_038613708.1 → XP_038469636.1  prolow-density lipoprotein receptor-related protein 1 isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

   Range

   1614746..1695694

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_038549747.1 → XP_038405675.1  LOW QUALITY PROTEIN: prolow-density lipoprotein receptor-related protein 1 isoform X2

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

   Range

   1324330..1405506

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_022424083.2 → XP_022279791.1  prolow-density lipoprotein receptor-related protein 1 isoform X1

   Conserved Domains (10) summary

   smart00192
   Location:3510 → 3543

   LDLa; Low-density lipoprotein receptor domain class A

   smart00135
   Location:3111 → 3153

   LY; Low-density lipoprotein-receptor YWTD domain

   smart00179
   Location:2999 → 3028

   EGF_CA; Calcium-binding EGF-like domain

   cd00112
   Location:3592 → 3626

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

   pfam00057
   Location:2874 → 2908

   Ldl_recept_a; Low-density lipoprotein receptor domain class A

   pfam00058
   Location:4030 → 4070

   Ldl_recept_b; Low-density lipoprotein receptor repeat class B

   cl00104
   Location:71 → 104

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

   pfam12662
   Location:2979 → 3002

   cEGF; Complement Clr-like EGF-like

   pfam14670
   Location:807 → 842

   FXa_inhibition; Coagulation Factor Xa inhibitory site

   cl26742
   Location:2270 → 2480

   SGL; SMP-30/Gluconolaconase/LRE-like region

2. XM_538245.7 → XP_538245.4  prolow-density lipoprotein receptor-related protein 1 isoform X2

   UniProtKB/TrEMBL

   A0A8C0MZ75, A0A8P0S657, J9P315

   Conserved Domains (10) summary

   smart00192
   Location:3493 → 3526

   LDLa; Low-density lipoprotein receptor domain class A

   smart00135
   Location:3094 → 3136

   LY; Low-density lipoprotein-receptor YWTD domain

   smart00179
   Location:2982 → 3011

   EGF_CA; Calcium-binding EGF-like domain

   COG3386
   Location:2253 → 2463

   YvrE; Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]

   cd00112
   Location:3575 → 3609

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

   pfam00057
   Location:2857 → 2891

   Ldl_recept_a; Low-density lipoprotein receptor domain class A

   pfam00058
   Location:4013 → 4053

   Ldl_recept_b; Low-density lipoprotein receptor repeat class B

   pfam12662
   Location:2962 → 2985

   cEGF; Complement Clr-like EGF-like

   pfam14670
   Location:807 → 842

   FXa_inhibition; Coagulation Factor Xa inhibitory site

   cl00104
   Location:71 → 104

   LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...