FAM20A FAM20A golgi associated secretory pathway pseudokinase [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: FAM20Aprovided by VGNC
Official Full Name: FAM20A golgi associated secretory pathway pseudokinaseprovided by VGNC
Primary source: VGNC:VGNC:40654
See related: Ensembl:ENSCAFG00845029370
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	9	NC_051813.1 (16869162..16918170, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	9	NC_006591.4 (16099687..16148637, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	9	NC_049230.1 (11670116..11719124)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	9	NC_049269.1 (15814064..15862997, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	9	NC_049750.1 (11670022..11719172)

Chromosome 9 - NC_051813.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein serine/threonine kinase activator activity	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: pseudokinase FAM20A

Names: family with sequence similarity 20, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051813.1 Reference ROS_Cfam_1.0

Range

16869162..16918170 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038676101.1 → XP_038532029.1 pseudokinase FAM20A

UniProtKB/TrEMBL

A0A8C0LGP9, A0A8C0S684, A0A8I3Q0M1

Related

ENSCAFP00845040793.1, ENSCAFT00845051997.1

Conserved Domains (1) summary

cl05973
Location:306 → 522

FAM20_C_like; C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins

Alternate UMICH_Zoey_3.1

Genomic

NC_049269.1 Alternate UMICH_Zoey_3.1

Range

15814064..15862997 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038485237.1 → XP_038341165.1 pseudokinase FAM20A

Conserved Domains (1) summary

cl05973
Location:306 → 522

FAM20_C_like; C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049750.1 Alternate UNSW_CanFamBas_1.0

Range

11670022..11719172

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038610764.1 → XP_038466692.1 pseudokinase FAM20A

Conserved Domains (1) summary

cl05973
Location:306 → 522

FAM20_C_like; C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049230.1 Alternate UU_Cfam_GSD_1.0

Range

11670116..11719124

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038546774.1 → XP_038402702.1 pseudokinase FAM20A

UniProtKB/TrEMBL

A0A8C0LGP9, A0A8C0S684, A0A8I3Q0M1

Conserved Domains (1) summary

cl05973
Location:306 → 522

FAM20_C_like; C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

16099687..16148637 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038628545.1 → XP_038484473.1 pseudokinase FAM20A

UniProtKB/TrEMBL

A0A8C0LGP9, A0A8C0S684, A0A8I3Q0M1

Conserved Domains (1) summary

cl05973
Location:306 → 522

FAM20_C_like; C-terminal putative kinase domain of FAM20 (family with sequence similarity 20), Drosophila Four-jointed (Fj), and related proteins