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CLMN calmin [ Canis lupus familiaris (dog) ]

Gene ID: 480427, updated on 25-Jul-2026
Official Symbol
CLMNprovided by VGNC
Official Full Name
calminprovided by VGNC
Primary source
VGNC:VGNC:39350
See related
Ensembl:ENSCAFG00845003303 RGD:12289748
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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Try the new Transcripts and proteins table
See CLMN in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (64345543..64460888, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (63665167..63770741, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (64404347..64519672, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (64020545..64135735, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (64079395..64194759, complement)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106559135 Neighboring gene dicer 1, ribonuclease III Neighboring gene uncharacterized LOC106559136 Neighboring gene spectrin repeat containing nuclear envelope family member 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Light-activated BioID - an optically activated proximity labeling system to study protein-protein interactions. Shafraz O, et al. J Cell Sci, 2023 Oct 1. PMID 37756605, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of meiotic nuclear membrane microtubule tethering complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
calmin
Names
calmin (calponin-like, transmembrane)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    64345543..64460888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038674558.1 → XP_038530486.1  calmin isoform X3

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21245
    Location:155 → 260
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins
    cl00030
    Location:29 → 110
    CH_SF; calponin homology (CH) domain superfamily

  2. XM_038674557.1 → XP_038530485.1  calmin isoform X2

    UniProtKB/TrEMBL
    A0A8I3MNH5, A0A8I3MV15
    Related
    ENSCAFP00845004646.1, ENSCAFT00845005850.1
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  3. XM_038674556.1 → XP_038530484.1  calmin isoform X1

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  4. XM_038674559.1 → XP_038530487.1  calmin isoform X4

    UniProtKB/TrEMBL
    A0A8I3MP64
    Conserved Domains (2) summary
    cd21245
    Location:118 → 223
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins
    cl00030
    Location:1 → 74
    CH_SF; calponin homology (CH) domain superfamily

  5. XM_038674560.1 → XP_038530488.1  calmin isoform X5

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Related
    ENSCAFP00845004729.1, ENSCAFT00845005944.1
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  6. XM_038674561.1 → XP_038530489.1  calmin isoform X6

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  7. XM_038674562.1 → XP_038530490.1  calmin isoform X7

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

RNA

  1. XR_005431439.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    64020545..64135735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038484139.1 → XP_038340067.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    64079395..64194759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038609748.1 → XP_038465676.1  

    Conserved Domains (2) summary
    cd21245
    Location:155 → 260
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins
    cl00030
    Location:29 → 110
    CH_SF; calponin homology (CH) domain superfamily

  2. XM_038609747.1 → XP_038465675.1  

    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  3. XM_038609746.1 → XP_038465674.1  

    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  4. XM_038609749.1 → XP_038465677.1  

  5. XM_038609750.1 → XP_038465678.1  

    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  6. XM_038609751.1 → XP_038465679.1  

    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  7. XM_038609752.1 → XP_038465680.1  

    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

RNA

  1. XR_005398180.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    64404347..64519672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038545648.1 → XP_038401576.1  calmin isoform X8

    UniProtKB/TrEMBL
    A0A8I3MNH5

RNA

  1. XR_005363731.1 RNA Sequence

  2. XR_005363730.1 RNA Sequence

  3. XR_005363729.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    63665167..63770741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594627.1 → XP_038450555.1  calmin isoform X3

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21245
    Location:155 → 260
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins
    cl00030
    Location:29 → 110
    CH_SF; calponin homology (CH) domain superfamily

  2. XM_038594620.1 → XP_038450548.1  calmin isoform X2

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  3. XM_038594612.1 → XP_038450540.1  calmin isoform X1

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  4. XM_014116141.3 → XP_013971616.1  calmin isoform X4

    UniProtKB/TrEMBL
    A0A8I3MP64
    Conserved Domains (2) summary
    COG5069
    Location:3 → 229
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    pfam00307
    Location:123 → 223
    CH; Calponin homology (CH) domain

  5. XM_038594646.1 → XP_038450574.1  calmin isoform X5

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  6. XM_038594657.1 → XP_038450585.1  calmin isoform X6

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

  7. XM_038594666.1 → XP_038450594.1  calmin isoform X7

    UniProtKB/TrEMBL
    A0A8I3MNH5
    Conserved Domains (2) summary
    cd21191
    Location:29 → 142
    CH_CLMN_rpt1; first calponin homology (CH) domain found in calmin and similar proteins
    cd21245
    Location:186 → 291
    CH_CLMN_rpt2; second calponin homology (CH) domain found in calmin and similar proteins

RNA

  1. XR_005390010.1 RNA Sequence

Nucleotide Protein
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