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BRMS1L BRMS1 like transcriptional repressor [ Canis lupus familiaris (dog) ]

Gene ID: 480292, updated on 5-Mar-2024

Summary

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Official Symbol
BRMS1Lprovided by VGNC
Official Full Name
BRMS1 like transcriptional repressorprovided by VGNC
Primary source
VGNC:VGNC:54778
See related
Ensembl:ENSCAFG00845002506
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (14594166..14624740)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (14283167..14313742)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (14649898..14680478)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (14294542..14325099)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (14360184..14390764)

Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene Ral GTPase activating protein catalytic subunit alpha 1 Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene 60S ribosomal protein L36-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111096996

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sin3-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
breast cancer metastasis-suppressor 1-like protein
Names
breast cancer metastasis-suppressor 1 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051812.1 Reference ROS_Cfam_1.0

    Range
    14594166..14624740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038673444.1 → XP_038529372.1  breast cancer metastasis-suppressor 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0M557
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  2. XM_038673445.1 → XP_038529373.1  breast cancer metastasis-suppressor 1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0L885, A0A8C0M557, A0A8C0TIF0, A0A8I3RQR5
    Related
    ENSCAFP00845003535.1, ENSCAFT00845004421.1
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  3. XM_038673446.1 → XP_038529374.1  breast cancer metastasis-suppressor 1-like protein isoform X3

    Conserved Domains (1) summary
    pfam08598
    Location:13 → 129
    Sds3; Sds3-like

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049268.1 Alternate UMICH_Zoey_3.1

    Range
    14294542..14325099
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038483060.1 → XP_038338988.1  breast cancer metastasis-suppressor 1-like protein isoform X1

    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  2. XM_038483061.1 → XP_038338989.1  breast cancer metastasis-suppressor 1-like protein isoform X2

    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  3. XM_038483062.1 → XP_038338990.1  breast cancer metastasis-suppressor 1-like protein isoform X3

    Conserved Domains (1) summary
    pfam08598
    Location:13 → 129
    Sds3; Sds3-like

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

    Range
    14360184..14390764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038608628.1 → XP_038464556.1  breast cancer metastasis-suppressor 1-like protein isoform X1

    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  2. XM_038608629.1 → XP_038464557.1  breast cancer metastasis-suppressor 1-like protein isoform X2

    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  3. XM_038608630.1 → XP_038464558.1  breast cancer metastasis-suppressor 1-like protein isoform X3

    Conserved Domains (1) summary
    pfam08598
    Location:13 → 129
    Sds3; Sds3-like

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

    Range
    14649898..14680478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544513.1 → XP_038400441.1  breast cancer metastasis-suppressor 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0M557
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  2. XM_038544514.1 → XP_038400442.1  breast cancer metastasis-suppressor 1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0L885, A0A8C0M557, A0A8C0TIF0, A0A8I3RQR5
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  3. XM_038544515.1 → XP_038400443.1  breast cancer metastasis-suppressor 1-like protein isoform X3

    Conserved Domains (1) summary
    pfam08598
    Location:13 → 129
    Sds3; Sds3-like

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14283167..14313742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005623328.4 → XP_005623385.1  breast cancer metastasis-suppressor 1-like protein isoform X1

    See identical proteins and their annotated locations for XP_005623385.1

    UniProtKB/TrEMBL
    A0A8C0M557
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  2. XM_537414.7 → XP_537414.2  breast cancer metastasis-suppressor 1-like protein isoform X2

    See identical proteins and their annotated locations for XP_537414.2

    UniProtKB/TrEMBL
    A0A8C0L885, A0A8C0M557, A0A8C0TIF0, A0A8I3RQR5
    Conserved Domains (1) summary
    pfam08598
    Location:61 → 177
    Sds3; Sds3-like

  3. XM_022421922.2 → XP_022277630.1  breast cancer metastasis-suppressor 1-like protein isoform X3

    Conserved Domains (1) summary
    pfam08598
    Location:13 → 129
    Sds3; Sds3-like
Nucleotide Protein
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