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FAM20B FAM20B glycosaminoglycan xylosylkinase [ Canis lupus familiaris (dog) ]

Gene ID: 480053, updated on 5-Mar-2024

Summary

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Official Symbol
FAM20Bprovided by VGNC
Official Full Name
FAM20B glycosaminoglycan xylosylkinaseprovided by VGNC
Primary source
VGNC:VGNC:40655
See related
Ensembl:ENSCAFG00845006695
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (20490401..20531493, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (20278423..20319327, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (20640414..20681477, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (20397558..20438460, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (20505728..20546645, complement)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene cytochrome c oxidase subunit 6C-like Neighboring gene uncharacterized LOC119877285 Neighboring gene torsin family 3 member A Neighboring gene 60S ribosomal protein L31-like Neighboring gene uncharacterized LOC111096648

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphotransferase activity, alcohol group as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosaminoglycan xylosylkinase
Names
family with sequence similarity 20, member B
XP_005622528.1
XP_022276703.1
XP_038336940.1
XP_038336941.1
XP_038336942.1
XP_038336943.1
XP_038398303.1
XP_038398304.1
XP_038398306.1
XP_038398307.1
XP_038421136.1
XP_038421150.1
XP_038462461.1
XP_038462462.1
XP_038462463.1
XP_038462464.1
XP_038527130.1
XP_038527131.1
XP_038527132.1
XP_038527133.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    20490401..20531493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038671205.1 → XP_038527133.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_038671204.1 → XP_038527132.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_038671202.1 → XP_038527130.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_038671203.1 → XP_038527131.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Related
    ENSCAFP00845009276.1, ENSCAFT00845011889.1
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    20397558..20438460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038481015.1 → XP_038336943.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_038481014.1 → XP_038336942.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_038481012.1 → XP_038336940.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_038481013.1 → XP_038336941.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    20505728..20546645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038606536.1 → XP_038462464.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_038606535.1 → XP_038462463.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_038606533.1 → XP_038462461.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_038606534.1 → XP_038462462.1  glycosaminoglycan xylosylkinase

    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    20640414..20681477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038542379.1 → XP_038398307.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_038542378.1 → XP_038398306.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_038542375.1 → XP_038398303.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_038542376.1 → XP_038398304.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    20278423..20319327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022420995.1 → XP_022276703.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  2. XM_038565222.1 → XP_038421150.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  3. XM_038565208.1 → XP_038421136.1  glycosaminoglycan xylosylkinase

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase

  4. XM_005622471.3 → XP_005622528.1  glycosaminoglycan xylosylkinase

    See identical proteins and their annotated locations for XP_005622528.1

    UniProtKB/TrEMBL
    A0A8C0KVS0, A0A8C0M979, A0A8I3MT65
    Conserved Domains (1) summary
    cd10470
    Location:188 → 394
    FAM20B_C; C-terminal putative kinase domain of FAM20B xylose kinase
Nucleotide Protein
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