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CCN1 cellular communication network factor 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479967, updated on 5-Mar-2024

Summary

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Official Symbol
CCN1provided by VGNC
Official Full Name
cellular communication network factor 1provided by VGNC
Primary source
VGNC:VGNC:50294
See related
Ensembl:ENSCAFG00845024708
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
CYR61
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (62984109..62986915, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (65092607..65095413, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (62986500..62989314, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (62514247..62517060, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (62482278..62484463, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like Neighboring gene zinc finger HIT-type containing 6 Neighboring gene uncharacterized LOC119872282 Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene uncharacterized LOC111096420

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CYR61; CCN family member 1
Names
cysteine rich angiogenic inducer 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    62984109..62986915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667747.1 → XP_038523675.1  CCN family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NHR9
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292 → 374
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_038667746.1 → XP_038523674.1  CCN family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NHR9, A0A8C0NHU0, A0A8C0R0Z3, A0A8I3S8V0
    Related
    ENSCAFP00845034200.1, ENSCAFT00845043654.1
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293 → 375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    62514247..62517060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480452.1 → XP_038336380.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292 → 374
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_038480451.1 → XP_038336379.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293 → 375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    62482278..62484463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603043.1 → XP_038458971.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292 → 374
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_038603042.1 → XP_038458970.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293 → 375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    62986500..62989314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538916.1 → XP_038394844.1  CCN family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NHR9
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292 → 374
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_038538915.1 → XP_038394843.1  CCN family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NHR9, A0A8C0NHU0, A0A8C0R0Z3, A0A8I3S8V0
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293 → 375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    65092607..65095413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022420550.2 → XP_022276258.1  CCN family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NHR9
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292 → 374
    GHB_like; Glycoprotein hormone beta chain homologues

  2. XM_537091.7 → XP_537091.2  CCN family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NHR9, A0A8C0NHU0, A0A8C0R0Z3, A0A8I3S8V0
    Conserved Domains (4) summary
    smart00214
    Location:100 → 159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:26 → 78
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229 → 272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293 → 375
    GHB_like; Glycoprotein hormone beta chain homologues
Nucleotide Protein
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