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ABCD3 ATP binding cassette subfamily D member 3 [ Canis lupus familiaris (dog) ]

Gene ID: 479939, updated on 17-Aug-2024

Summary

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Official Symbol
ABCD3provided by VGNC
Official Full Name
ATP binding cassette subfamily D member 3provided by VGNC
Primary source
VGNC:VGNC:37447
See related
Ensembl:ENSCAFG00845014838
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (55116365..55193330, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (57449009..57525742, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (55234335..55310979, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (54797137..54873570, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (54781385..54858240, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106558959 Neighboring gene coagulation factor III, tissue factor Neighboring gene uncharacterized LOC102151598 Neighboring gene uncharacterized LOC119863946 Neighboring gene poly(A) polymerase type 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    55116365..55193330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038670070.1 → XP_038525998.1  ATP-binding cassette sub-family D member 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C0KFG0, A0A8C0Q420, A0A8C0Q5L3, A0A8I3NS88, A0A8I3P3Y1
    Related
    ENSCAFP00845020936.1, ENSCAFT00845026557.1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_038670068.1 → XP_038525996.1  ATP-binding cassette sub-family D member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_038670069.1 → XP_038525997.1  ATP-binding cassette sub-family D member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_038670071.1 → XP_038525999.1  ATP-binding cassette sub-family D member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QEW5
    Conserved Domains (1) summary
    TIGR00954
    Location:28 → 610
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  5. XM_038670072.1 → XP_038526000.1  ATP-binding cassette sub-family D member 3 isoform X5

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 488
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

RNA

  1. XR_005428938.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    54797137..54873570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480002.1 → XP_038335930.1  ATP-binding cassette sub-family D member 3 isoform X4

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_038480000.1 → XP_038335928.1  ATP-binding cassette sub-family D member 3 isoform X2

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_038480001.1 → XP_038335929.1  ATP-binding cassette sub-family D member 3 isoform X3

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_038480003.1 → XP_038335931.1  ATP-binding cassette sub-family D member 3 isoform X1

    Conserved Domains (1) summary
    TIGR00954
    Location:28 → 610
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  5. XM_038480004.1 → XP_038335932.1  ATP-binding cassette sub-family D member 3 isoform X5

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 488
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

RNA

  1. XR_005327330.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    54781385..54858240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038605437.1 → XP_038461365.1  ATP-binding cassette sub-family D member 3 isoform X4

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_038605435.1 → XP_038461363.1  ATP-binding cassette sub-family D member 3 isoform X2

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_038605436.1 → XP_038461364.1  ATP-binding cassette sub-family D member 3 isoform X3

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_038605438.1 → XP_038461366.1  ATP-binding cassette sub-family D member 3 isoform X5

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 488
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

RNA

  1. XR_005395748.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    55234335..55310979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038541293.1 → XP_038397221.1  ATP-binding cassette sub-family D member 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C0KFG0, A0A8C0Q420, A0A8C0Q5L3, A0A8I3NS88, A0A8I3P3Y1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_038541291.1 → XP_038397219.1  ATP-binding cassette sub-family D member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_038541292.1 → XP_038397220.1  ATP-binding cassette sub-family D member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_038541294.1 → XP_038397222.1  ATP-binding cassette sub-family D member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QEW5
    Conserved Domains (1) summary
    TIGR00954
    Location:28 → 610
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  5. XM_038541295.1 → XP_038397223.1  ATP-binding cassette sub-family D member 3 isoform X5

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 488
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

RNA

  1. XR_005361199.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57449009..57525742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038554733.1 → XP_038410661.1  ATP-binding cassette sub-family D member 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C0KFG0, A0A8C0Q420, A0A8C0Q5L3, A0A8I3NS88, A0A8I3P3Y1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 648
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_038554721.1 → XP_038410649.1  ATP-binding cassette sub-family D member 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  3. XM_038554727.1 → XP_038410655.1  ATP-binding cassette sub-family D member 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C0N348
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 620
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  4. XM_537064.6 → XP_537064.5  ATP-binding cassette sub-family D member 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QEW5
    Conserved Domains (1) summary
    TIGR00954
    Location:28 → 610
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  5. XM_038554747.1 → XP_038410675.1  ATP-binding cassette sub-family D member 3 isoform X5

    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 488
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

RNA

  1. XR_005368027.1 RNA Sequence

Nucleotide Protein
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