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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051808.1 Reference ROS_Cfam_1.0
- Range
-
73833571..73877695 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038663947.1 → XP_038519875.1 dnaJ homolog subfamily C member 21 isoform X2
- UniProtKB/TrEMBL
- A0A8C0KW93, A0A8I3MX99
- Related
- ENSCAFP00845001153.1, ENSCAFT00845001472.1
- Conserved Domains (4) summary
-
- COG5269
Location:4 → 269
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- PRK10767
Location:2 → 66
- PRK10767; chaperone protein DnaJ; Provisional
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038663946.1 → XP_038519874.1 dnaJ homolog subfamily C member 21 isoform X1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
RNA
-
XR_005426216.1 RNA Sequence
-
XR_005426215.1 RNA Sequence
-
XR_005426214.1 RNA Sequence
-
XR_005426213.1 RNA Sequence
-
XR_005426211.1 RNA Sequence
-
XR_005426210.1 RNA Sequence
-
XR_005426212.1 RNA Sequence
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049264.1 Alternate UMICH_Zoey_3.1
- Range
-
73581230..73625321 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038474231.1 → XP_038330159.1
- Conserved Domains (4) summary
-
- COG5269
Location:4 → 269
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- PRK10767
Location:2 → 66
- PRK10767; chaperone protein DnaJ; Provisional
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038474230.1 → XP_038330158.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
RNA
-
XR_005324813.1 RNA Sequence
-
XR_005324812.1 RNA Sequence
-
XR_005324811.1 RNA Sequence
-
XR_005324810.1 RNA Sequence
-
XR_005324808.1 RNA Sequence
-
XR_005324807.1 RNA Sequence
-
XR_005324809.1 RNA Sequence
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049745.1 Alternate UNSW_CanFamBas_1.0
- Range
-
73704791..73748986 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038599632.1 → XP_038455560.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599630.1 → XP_038455558.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599629.1 → XP_038455557.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599628.1 → XP_038455556.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599627.1 → XP_038455555.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599626.1 → XP_038455554.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599625.1 → XP_038455553.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599623.1 → XP_038455551.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599633.1 → XP_038455561.1
- Conserved Domains (4) summary
-
- COG5269
Location:4 → 269
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- PRK10767
Location:2 → 66
- PRK10767; chaperone protein DnaJ; Provisional
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599624.1 → XP_038455552.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038599631.1 → XP_038455559.1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049225.1 Alternate UU_Cfam_GSD_1.0
- Range
-
74238074..74282180 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038535357.1 → XP_038391285.1 dnaJ homolog subfamily C member 21 isoform X2
- UniProtKB/TrEMBL
- A0A8C0KW93, A0A8I3MX99
- Conserved Domains (4) summary
-
- COG5269
Location:4 → 269
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- PRK10767
Location:2 → 66
- PRK10767; chaperone protein DnaJ; Provisional
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_038535356.1 → XP_038391284.1 dnaJ homolog subfamily C member 21 isoform X1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
RNA
-
XR_005358602.1 RNA Sequence
-
XR_005358601.1 RNA Sequence
-
XR_005358600.1 RNA Sequence
-
XR_005358599.1 RNA Sequence
-
XR_005358597.1 RNA Sequence
-
XR_005358596.1 RNA Sequence
-
XR_005358598.1 RNA Sequence
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
72944316..72988410 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005619400.3 → XP_005619457.1 dnaJ homolog subfamily C member 21 isoform X2
- UniProtKB/TrEMBL
- A0A8C0KW93, A0A8I3MX99
- Conserved Domains (4) summary
-
- COG5269
Location:4 → 269
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- PRK10767
Location:2 → 66
- PRK10767; chaperone protein DnaJ; Provisional
- sd00020
Location:316 → 338
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:314 → 339
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
-
XM_022417933.2 → XP_022273641.1 dnaJ homolog subfamily C member 21 isoform X1
- Conserved Domains (3) summary
-
- COG5269
Location:44 → 283
- ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
- sd00020
Location:330 → 352
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam12171
Location:328 → 353
- zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
RNA
-
XR_005339286.1 RNA Sequence
-
XR_005339285.1 RNA Sequence
-
XR_005339281.1 RNA Sequence
-
XR_005339277.1 RNA Sequence
-
XR_002626121.2 RNA Sequence
-
XR_005339276.1 RNA Sequence
-
XR_002626122.2 RNA Sequence