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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051808.1 Reference ROS_Cfam_1.0
- Range
-
4512625..4591187 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038662478.1 → XP_038518406.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038662479.1 → XP_038518407.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038662480.1 → XP_038518408.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Related
- ENSCAFP00845004794.1, ENSCAFT00845006034.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038662477.1 → XP_038518405.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049264.1 Alternate UMICH_Zoey_3.1
- Range
-
4523866..4602326 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038472841.1 → XP_038328769.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038472842.1 → XP_038328770.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038472843.1 → XP_038328771.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038472840.1 → XP_038328768.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049745.1 Alternate UNSW_CanFamBas_1.0
- Range
-
4641317..4719844 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038598177.1 → XP_038454105.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038598178.1 → XP_038454106.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038598176.1 → XP_038454104.1
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049225.1 Alternate UU_Cfam_GSD_1.0
- Range
-
4862950..4941668 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038533856.1 → XP_038389784.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038533857.1 → XP_038389785.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_038533855.1 → XP_038389783.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
4473098..4551614 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_536339.6 → XP_536339.2 tubulin-specific chaperone E
See identical proteins and their annotated locations for XP_536339.2
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_005618805.4 → XP_005618862.1 tubulin-specific chaperone E
See identical proteins and their annotated locations for XP_005618862.1
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_022417398.2 → XP_022273106.1 tubulin-specific chaperone E
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42
-
XM_005618803.3 → XP_005618860.1 tubulin-specific chaperone E
See identical proteins and their annotated locations for XP_005618860.1
- UniProtKB/TrEMBL
- A0A8C0LRL6, A0A8I3MQ87
- Conserved Domains (5) summary
-
- smart01052
Location:10 → 75
- CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
- COG4886
Location:174 → 370
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00033
Location:155 → 180
- LRR_RI; leucine-rich repeat [structural motif]
- cd17044
Location:445 → 527
- Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins
- cd21340
Location:154 → 189
- PPP1R42; protein phosphatase 1 regulatory subunit 42