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FAN1 FANCD2 and FANCI associated nuclease 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479017, updated on 1-Mar-2025
Official Symbol
FAN1provided by VGNC
Official Full Name
FANCD2 and FANCI associated nuclease 1provided by VGNC
Primary source
VGNC:VGNC:40715
See related
Ensembl:ENSCAFG00845021476 RGD:12116877
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
MTMR15
Orthologs
all
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Try the new Transcripts and proteins table
See FAN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (38394079..38430387, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (40698132..40737657, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (38383672..38423530, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (37919389..37955716, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (38179558..38215917, complement)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 1 Neighboring gene microRNA mir-211 Neighboring gene uncharacterized LOC102155962 Neighboring gene myotubularin related protein 10 Neighboring gene M-phase phosphoprotein 10 Neighboring gene methylmalonyl-CoA epimerase

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 5'-flap endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flap-structured DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
fanconi-associated nuclease 1
Names
FANCD2/FANCI-associated nuclease 1
myotubularin related protein 15
XP_005618326.2
XP_005618327.2
XP_005618328.2
XP_005618329.2
XP_013967838.2
XP_013967839.2
XP_038327604.1
XP_038327605.1
XP_038327606.1
XP_038327607.1
XP_038327608.1
XP_038327609.1
XP_038327610.1
XP_038388531.1
XP_038388532.1
XP_038388533.1
XP_038388534.1
XP_038388535.1
XP_038388536.1
XP_038452835.1
XP_038452837.1
XP_038452838.1
XP_038452839.1
XP_038452840.1
XP_038452841.1
XP_038452842.1
XP_038517046.1
XP_038517047.1
XP_038517048.1
XP_038517049.1
XP_038517050.1
XP_038517051.1
XP_038517052.1
XP_856650.2

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    38394079..38430387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038661118.1 → XP_038517046.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0MAV8, A0A8I3PL86
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  2. XM_038661120.1 → XP_038517048.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0MAV8, A0A8I3PL86
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  3. XM_038661122.1 → XP_038517050.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0MAV8, A0A8I3PL86
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  4. XM_038661121.1 → XP_038517049.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0MAV8, A0A8I3PL86
    Related
    ENSCAFP00845029702.1, ENSCAFT00845037905.1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  5. XM_038661119.1 → XP_038517047.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0MAV8, A0A8I3PL86
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  6. XM_038661123.1 → XP_038517051.1  fanconi-associated nuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0M3S1, A0A8C0RBY5
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 982
    FAN1-like; repair nuclease FAN1

  7. XM_038661124.1 → XP_038517052.1  fanconi-associated nuclease 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0M7E5
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 943
    FAN1-like; repair nuclease FAN1

RNA

  1. XR_005424450.1 RNA Sequence

  2. XR_005424451.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    37919389..37955716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471677.1 → XP_038327605.1  fanconi-associated nuclease 1 isoform X1

  2. XM_038471679.1 → XP_038327607.1  fanconi-associated nuclease 1 isoform X1

  3. XM_038471680.1 → XP_038327608.1  fanconi-associated nuclease 1 isoform X1

  4. XM_038471678.1 → XP_038327606.1  fanconi-associated nuclease 1 isoform X1

  5. XM_038471681.1 → XP_038327609.1  fanconi-associated nuclease 1 isoform X2

  6. XM_038471676.1 → XP_038327604.1  fanconi-associated nuclease 1 isoform X1

  7. XM_038471682.1 → XP_038327610.1  fanconi-associated nuclease 1 isoform X3

RNA

  1. XR_005323249.1 RNA Sequence

  2. XR_005323250.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    38179558..38215917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038596907.1 → XP_038452835.1  fanconi-associated nuclease 1 isoform X1

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  2. XM_038596910.1 → XP_038452838.1  fanconi-associated nuclease 1 isoform X1

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  3. XM_038596912.1 → XP_038452840.1  fanconi-associated nuclease 1 isoform X1

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  4. XM_038596911.1 → XP_038452839.1  fanconi-associated nuclease 1 isoform X1

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  5. XM_038596909.1 → XP_038452837.1  fanconi-associated nuclease 1 isoform X1

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  6. XM_038596913.1 → XP_038452841.1  fanconi-associated nuclease 1 isoform X2

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 982
    FAN1-like; repair nuclease FAN1

  7. XM_038596914.1 → XP_038452842.1  fanconi-associated nuclease 1 isoform X3

    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 943
    FAN1-like; repair nuclease FAN1

RNA

  1. XR_005391432.1 RNA Sequence

  2. XR_005391433.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    38383672..38423530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038532604.1 → XP_038388532.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8C0T694

  2. XM_038532606.1 → XP_038388534.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8C0T694

  3. XM_038532605.1 → XP_038388533.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8C0T694

  4. XM_038532607.1 → XP_038388535.1  fanconi-associated nuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8C0Z278

  5. XM_038532603.1 → XP_038388531.1  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8C0T694

  6. XM_038532608.1 → XP_038388536.1  fanconi-associated nuclease 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0T5A8

RNA

  1. XR_005356908.1 RNA Sequence

  2. XR_005356909.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    40698132..40737657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005618271.4 → XP_005618328.2  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0SFF1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  2. XM_005618270.3 → XP_005618327.2  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0SFF1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  3. XM_005618272.3 → XP_005618329.2  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0SFF1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  4. XM_851557.6 → XP_856650.2  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0SFF1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  5. XM_005618269.4 → XP_005618326.2  fanconi-associated nuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0SFF1
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 1029
    FAN1-like; repair nuclease FAN1

  6. XM_014112363.3 → XP_013967838.2  fanconi-associated nuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0T3F4, A0A8P0P3K3
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 982
    FAN1-like; repair nuclease FAN1

  7. XM_014112364.3 → XP_013967839.2  fanconi-associated nuclease 1 isoform X3

    UniProtKB/TrEMBL
    A0A8P0P8H3
    Conserved Domains (2) summary
    smart00734
    Location:40 → 61
    ZnF_Rad18; Rad18-like CCHC zinc finger
    cd22326
    Location:385 → 943
    FAN1-like; repair nuclease FAN1

RNA

  1. XR_002625025.2 RNA Sequence

  2. XR_002625026.2 RNA Sequence

Nucleotide Protein
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