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PPOX protoporphyrinogen oxidase [ Canis lupus familiaris (dog) ]

Gene ID: 478980, updated on 18-Sep-2020

Summary

Official Symbol
PPOXprovided by VGNC
Official Full Name
protoporphyrinogen oxidaseprovided by VGNC
Primary source
VGNC:VGNC:44874
See related
Ensembl:ENSCAFG00000012811
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See PPOX in Genome Data Viewer
Location:
chromosome: 38
Exon count:
12
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 38 NC_006620.3 (21306973..21310892, complement)

Chromosome 38 - NC_006620.3Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 4 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene ubiquitin specific peptidase 21 Neighboring gene ubiquitin-fold modifier conjugating enzyme 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006620.3 Chromosome 38 Reference CanFam3.1 Primary Assembly

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
protoporphyrinogen oxidase
XP_005640930.1
XP_022271126.1
XP_022271127.1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006620.3 Reference CanFam3.1 Primary Assembly

    Range
    21306973..21310892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022415418.1XP_022271126.1  protoporphyrinogen oxidase isoform X2

    Related
    ENSCAFP00000040563.2, ENSCAFT00000046181.3
    Conserved Domains (1) summary
    cl27533
    Location:5437
    HemY; Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
  2. XM_005640873.2XP_005640930.1  protoporphyrinogen oxidase isoform X1

    Related
    ENSCAFP00000018861.4, ENSCAFT00000020328.4
    Conserved Domains (3) summary
    COG1232
    Location:5474
    HemY; Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
    pfam13450
    Location:765
    NAD_binding_8; NAD(P)-binding Rossmann-like domain
    cl21454
    Location:230364
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
  3. XM_022415419.1XP_022271127.1  protoporphyrinogen oxidase isoform X3

    Conserved Domains (1) summary
    cl27533
    Location:4312
    HemY; Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
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