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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001190737.2 → NP_001177666.1  nuclear factor 1 B-type isoform 1
See identical proteins and their annotated locations for NP_001177666.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AI140312, AL136366, AL441963, BX648845
- Consensus CDS
-
CCDS55291.1
- UniProtKB/Swiss-Prot
-
O00712
- Related
- ENSP00000370340.1, ENST00000380953.6
- Conserved Domains (3) summary
-
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
- pfam00859
Location:209 → 493
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:9 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
-
NM_001190738.2 → NP_001177667.1  nuclear factor 1 B-type isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) has multiple differences, one of which results in translation from an upstream start codon, compared to variant 1. The resulting protein (isoform 2) has a different and longer N-terminus and a shorter C-terminus when it is compared to isoform 1.
- Source sequence(s)
-
AK131233, AL136366, AL137017, AL441963
- Consensus CDS
-
CCDS55292.1
- UniProtKB/Swiss-Prot
-
O00712
- UniProtKB/TrEMBL
-
A0A0A0MRX8
- Related
- ENSP00000370321.4, ENST00000380934.8
- Conserved Domains (3) summary
-
- cl00055
Location:95 → 199
- MH1; N-terminal Mad Homology 1 (MH1) domain
- pfam00859
Location:235 → 441
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:37 → 73
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
-
NM_001282787.2 → NP_001269716.1  nuclear factor 1 B-type isoform 4
See identical proteins and their annotated locations for NP_001269716.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains a distinct 5' UTR, lacks an in-frame portion of the 5' coding region and contains an alternate in-frame exon in the 3' coding region, compared to variant 1. The resulting isoform (4) is shorter compared to isoform 1.
- Source sequence(s)
-
AI140312, AL441963, BP372854, BX648416
- Consensus CDS
-
CCDS65007.1
- UniProtKB/Swiss-Prot
-
O00712
- Related
- ENSP00000442888.1, ENST00000543693.5
- Conserved Domains (1) summary
-
- pfam00859
Location:1 → 237
- CTF_NFI; CTF/NF-I family transcription modulation region
-
NM_001369458.1 → NP_001356387.1  nuclear factor 1 B-type isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) encodes the longest isoform (5).
- Source sequence(s)
-
AL136366, AL159169, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:231 → 520
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:32 → 69
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:91 → 195
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369459.1 → NP_001356388.1  nuclear factor 1 B-type isoform 6
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL159169, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:231 → 511
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:32 → 69
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:91 → 195
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369460.1 → NP_001356389.1  nuclear factor 1 B-type isoform 7
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94389.1
- UniProtKB/TrEMBL
-
A0A2R8Y7V8
- Related
- ENSP00000496424.1, ENST00000646622.1
- Conserved Domains (3) summary
-
- pfam00859
Location:205 → 494
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:65 → 169
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369461.1 → NP_001356390.1  nuclear factor 1 B-type isoform 8
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94386.1
- UniProtKB/TrEMBL
-
Q5VW30
- Related
- ENSP00000380705.3, ENST00000397575.7
- Conserved Domains (3) summary
-
- pfam00859
Location:209 → 489
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369462.1 → NP_001356391.1  nuclear factor 1 B-type isoform 9
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL159169, AL441963
- Conserved Domains (4) summary
-
- pfam00859
Location:231 → 438
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:32 → 69
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:91 → 195
- MH1; N-terminal Mad Homology 1 (MH1) domain
- cl30265
Location:407 → 497
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369463.1 → NP_001356392.1  nuclear factor 1 B-type isoform 10
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:205 → 466
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:65 → 169
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369464.1 → NP_001356393.1  nuclear factor 1 B-type isoform 11
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94385.1
- UniProtKB/TrEMBL
-
Q5VW27
- Related
- ENSP00000380709.2, ENST00000397579.6
- Conserved Domains (4) summary
-
- pfam00859
Location:209 → 416
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
- cl30265
Location:385 → 475
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369465.1 → NP_001356394.1  nuclear factor 1 B-type isoform 12
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:200 → 484
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:1 → 38
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:60 → 164
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369466.1 → NP_001356395.1  nuclear factor 1 B-type isoform 13
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Related
- ENSP00000490945.1, ENST00000635877.1
- Conserved Domains (4) summary
-
- pfam00859
Location:205 → 412
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:65 → 169
- MH1; N-terminal Mad Homology 1 (MH1) domain
- cl30265
Location:381 → 471
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369467.1 → NP_001356396.1  nuclear factor 1 B-type isoform 14
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94384.1
- UniProtKB/TrEMBL
-
A0A1B0GU97
- Related
- ENSP00000490020.1, ENST00000637640.1
- Conserved Domains (4) summary
-
- PRK15127
Location:376 → 466
- PRK15127; multidrug efflux RND transporter permease subunit AcrB
- pfam10524
Location:2 → 38
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:60 → 164
- MH1; N-terminal Mad Homology 1 (MH1) domain
- pfam00859
Location:200 → 407
- CTF_NFI; CTF/NF-I family transcription modulation region
-
NM_001369468.1 → NP_001356397.1  nuclear factor 1 B-type isoform 15
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL159169, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:231 → 437
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:32 → 69
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:91 → 195
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369469.1 → NP_001356398.1  nuclear factor 1 B-type isoform 16
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:161 → 368
- CTF_NFI; CTF/NF-I family transcription modulation region
- cl00055
Location:21 → 125
- MH1; N-terminal Mad Homology 1 (MH1) domain
- cl30265
Location:337 → 427
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369470.1 → NP_001356399.1  nuclear factor 1 B-type isoform 17
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94390.1
- UniProtKB/TrEMBL
-
A0A1B0GVN4
- Related
- ENSP00000490588.1, ENST00000636432.1
- Conserved Domains (3) summary
-
- pfam10524
Location:3 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:64 → 116
- MH1; N-terminal Mad Homology 1 (MH1) domain
- pfam00859
Location:130 → 419
- CTF_NFI; CTF/NF-I family transcription modulation region
-
NM_001369471.1 → NP_001356400.1  nuclear factor 1 B-type isoform 18
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:209 → 414
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369472.1 → NP_001356401.1  nuclear factor 1 B-type isoform 19
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94388.1
- UniProtKB/TrEMBL
-
U3KQE8
- Related
- ENSP00000475813.2, ENST00000606230.2
- Conserved Domains (3) summary
-
- pfam00859
Location:205 → 411
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:65 → 169
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369473.1 → NP_001356402.1  nuclear factor 1 B-type isoform 20
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:205 → 410
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:65 → 169
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369474.1 → NP_001356403.1  nuclear factor 1 B-type isoform 21
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:204 → 409
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:6 → 42
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:64 → 168
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369475.1 → NP_001356404.1  nuclear factor 1 B-type isoform 22
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (4) summary
-
- pfam00859
Location:134 → 341
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:68 → 120
- MH1; N-terminal Mad Homology 1 (MH1) domain
- cl30265
Location:310 → 400
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369476.1 → NP_001356405.1  nuclear factor 1 B-type isoform 23
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94383.1
- UniProtKB/TrEMBL
-
A0A1B0GW37
- Related
- ENSP00000490762.1, ENST00000636057.1
- Conserved Domains (3) summary
-
- pfam10524
Location:2 → 38
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:60 → 164
- MH1; N-terminal Mad Homology 1 (MH1) domain
- pfam00859
Location:200 → 406
- CTF_NFI; CTF/NF-I family transcription modulation region
-
NM_001369477.1 → NP_001356406.1  nuclear factor 1 B-type isoform 24
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:191 → 396
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369478.1 → NP_001356407.1  nuclear factor 1 B-type isoform 25
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (3) summary
-
- pfam00859
Location:130 → 336
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:4 → 43
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:64 → 116
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_001369479.1 → NP_001356408.1  nuclear factor 1 B-type isoform 26
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Consensus CDS
-
CCDS94382.1
- UniProtKB/TrEMBL
-
A0A1B0GWB8
- Related
- ENSP00000490864.1, ENST00000636735.1
- Conserved Domains (2) summary
-
- pfam00859
Location:30 → 237
- CTF_NFI; CTF/NF-I family transcription modulation region
- cl30265
Location:206 → 296
- PRK09579; multidrug efflux protein; Reviewed
-
NM_001369480.1 → NP_001356409.1  nuclear factor 1 B-type isoform 27
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
- Conserved Domains (1) summary
-
- pfam00859
Location:30 → 236
- CTF_NFI; CTF/NF-I family transcription modulation region
-
NM_001369481.1 → NP_001356410.1  nuclear factor 1 B-type isoform 28
Status: VALIDATED
- Source sequence(s)
-
AL136366
- Consensus CDS
-
CCDS94387.1
- UniProtKB/TrEMBL
-
Q5W0Y9
- Related
- ENSP00000370308.3, ENST00000380921.3
- Conserved Domains (2) summary
-
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
-
NM_005596.3 → NP_005587.2  nuclear factor 1 B-type isoform 3
See identical proteins and their annotated locations for NP_005587.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks alternate exons in the 3' end, compared to variant 1. The resulting protein (isoform 3) is shorter when it is compared to isoform 1.
- Source sequence(s)
-
AI140312, AL441963, BC001283, BX648845, DA785516
- Consensus CDS
-
CCDS6474.1
- UniProtKB/Swiss-Prot
- O00712, Q96J45
- UniProtKB/TrEMBL
-
Q5VW28
- Related
- ENSP00000370346.3, ENST00000380959.7
- Conserved Domains (3) summary
-
- pfam00859
Location:209 → 415
- CTF_NFI; CTF/NF-I family transcription modulation region
- pfam10524
Location:10 → 47
- NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
- cl00055
Location:69 → 173
- MH1; N-terminal Mad Homology 1 (MH1) domain
RNA
-
NR_161382.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
-
NR_161383.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
-
NR_161384.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL136366, AL441963
-
NR_161385.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AL441963
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
14081843..14532077 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1Â Alternate T2T-CHM13v2.0
- Range
-
14091330..14541744 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)