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VAPB VAMP associated protein B and C [ Canis lupus familiaris (dog) ]

Gene ID: 477274, updated on 25-Jul-2026
Official Symbol
VAPBprovided by VGNC
Official Full Name
VAMP associated protein B and Cprovided by VGNC
Primary source
VGNC:VGNC:48230
See related
Ensembl:ENSCAFG00845013414 RGD:12381795
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See VAPB in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (44048066..44104061)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (42428808..42484615)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (43929924..43985979)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (43152527..43208360)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (43270720..43326518)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene RAB22A, member RAS oncogene family Neighboring gene uncharacterized LOC119865704 Neighboring gene uncharacterized LOC119865705 Neighboring gene uncharacterized LOC119865706 Neighboring gene APC down-regulated 1 like Neighboring gene uncharacterized LOC119865573

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FFAT motif binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
vesicle-associated membrane protein-associated protein B/C

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    44048066..44104061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434207.1 → XP_038290135.1  vesicle-associated membrane protein-associated protein B/C isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCC0, A0A8I3NZT7
    Related
    ENSCAFP00845018777.1, ENSCAFT00845023907.1
    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    43152527..43208360
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038509367.1 → XP_038365295.1  

    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

  2. XM_038509365.1 → XP_038365293.1  

  3. XM_038509366.1 → XP_038365294.1  

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    43270720..43326518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038636990.1 → XP_038492918.1  

    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

  2. XM_038636988.1 → XP_038492916.1  

  3. XM_038636989.1 → XP_038492917.1  

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    43929924..43985979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038572712.1 → XP_038428640.1  vesicle-associated membrane protein-associated protein B/C isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCC0, A0A8I3NZT7
    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

  2. XM_038572710.1 → XP_038428638.1  vesicle-associated membrane protein-associated protein B/C isoform X6

  3. XM_038572711.1 → XP_038428639.1  vesicle-associated membrane protein-associated protein B/C isoform X7

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    42428808..42484615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534466.7 → XP_534466.2  vesicle-associated membrane protein-associated protein B/C isoform X1

    UniProtKB/TrEMBL
    A0A8C0LCC0, A0A8I3NZT7
    Conserved Domains (1) summary
    pfam00635
    Location:8 → 111
    Motile_Sperm; MSP (Major sperm protein) domain

  2. XM_005635226.4 → XP_005635283.1  vesicle-associated membrane protein-associated protein B/C isoform X8

    Conserved Domains (1) summary
    pfam00635
    Location:42 → 127
    Motile_Sperm; MSP (Major sperm protein) domain

  3. XM_022408827.2 → XP_022264535.1  vesicle-associated membrane protein-associated protein B/C isoform X9

    Conserved Domains (1) summary
    pfam00635
    Location:32 → 117
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
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