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CTNNBL1 catenin beta like 1 [ Canis lupus familiaris (dog) ]

Gene ID: 477224, updated on 5-Mar-2024

Summary

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Official Symbol
CTNNBL1provided by VGNC
Official Full Name
catenin beta like 1provided by VGNC
Primary source
VGNC:VGNC:39701
See related
Ensembl:ENSCAFG00845028537
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 24
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (26950603..27111357)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (25899554..26060808)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (26820586..26981963)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (26225333..26386576)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (26332842..26493989)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106557698 Neighboring gene BLCAP apoptosis inducing factor Neighboring gene uncharacterized LOC119865545 Neighboring gene uncharacterized LOC119865666 Neighboring gene V-set and transmembrane domain containing 2 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-catenin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    26950603..27111357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038433800.1 → XP_038289728.1  beta-catenin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:57 → 162
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  2. XM_038433802.1 → XP_038289730.1  beta-catenin-like protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  3. XM_038433798.1 → XP_038289726.1  beta-catenin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  4. XM_038433799.1 → XP_038289727.1  beta-catenin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Related
    ENSCAFP00845039556.1, ENSCAFT00845050451.1
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  5. XM_038433801.1 → XP_038289729.1  beta-catenin-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3PZ00, A0A8P0SDW5
    Conserved Domains (1) summary
    pfam08216
    Location:30 → 135
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    26225333..26386576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038508950.1 → XP_038364878.1  beta-catenin-like protein 1 isoform X3

    Conserved Domains (1) summary
    pfam08216
    Location:57 → 162
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  2. XM_038508952.1 → XP_038364880.1  beta-catenin-like protein 1 isoform X5

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  3. XM_038508948.1 → XP_038364876.1  beta-catenin-like protein 1 isoform X1

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  4. XM_038508949.1 → XP_038364877.1  beta-catenin-like protein 1 isoform X2

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  5. XM_038508951.1 → XP_038364879.1  beta-catenin-like protein 1 isoform X4

    Conserved Domains (1) summary
    pfam08216
    Location:30 → 135
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    26332842..26493989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038636536.1 → XP_038492464.1  beta-catenin-like protein 1 isoform X3

    Conserved Domains (1) summary
    pfam08216
    Location:57 → 162
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  2. XM_038636538.1 → XP_038492466.1  beta-catenin-like protein 1 isoform X5

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  3. XM_038636534.1 → XP_038492462.1  beta-catenin-like protein 1 isoform X1

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  4. XM_038636535.1 → XP_038492463.1  beta-catenin-like protein 1 isoform X2

    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  5. XM_038636537.1 → XP_038492465.1  beta-catenin-like protein 1 isoform X4

    Conserved Domains (1) summary
    pfam08216
    Location:30 → 135
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    26820586..26981963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038572282.1 → XP_038428210.1  beta-catenin-like protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5

  2. XM_038572285.1 → XP_038428213.1  beta-catenin-like protein 1 isoform X9

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5

  3. XM_038572281.1 → XP_038428209.1  beta-catenin-like protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5

  4. XM_038572283.1 → XP_038428211.1  beta-catenin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  5. XM_038572284.1 → XP_038428212.1  beta-catenin-like protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A8I3PZ00, A0A8P0SDW5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    25899554..26060808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022409500.2 → XP_022265208.1  beta-catenin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:57 → 162
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  2. XM_022409502.2 → XP_022265210.2  beta-catenin-like protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  3. XM_022409499.2 → XP_022265207.2  beta-catenin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  4. XM_005635041.4 → XP_005635098.4  beta-catenin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0RTV1, A0A8P0TKN5
    Conserved Domains (1) summary
    pfam08216
    Location:88 → 193
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear

  5. XM_022409501.2 → XP_022265209.1  beta-catenin-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8I3PZ00, A0A8P0SDW5
    Conserved Domains (1) summary
    pfam08216
    Location:30 → 135
    CTNNBL; Catenin-beta-like, Arm-motif containing nuclear
Nucleotide Protein
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