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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051824.1 Reference ROS_Cfam_1.0
- Range
-
40388459..40419510
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038427780.1 → XP_038283708.1 laminin subunit beta-2 isoform X6
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Related
- ENSCAFP00845038430.1, ENSCAFT00845048988.1
- Conserved Domains (6) summary
-
- smart00180
Location:825 → 870
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:563 → 604
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- TIGR02168
Location:1249 → 1838
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00053
Location:1191 → 1238
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:90 → 323
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1775 → 1846
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427775.1 → XP_038283703.1 laminin subunit beta-2 isoform X1
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1544 → 1863
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:859 → 904
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:597 → 638
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1225 → 1272
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:124 → 357
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1809 → 1880
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427777.1 → XP_038283705.1 laminin subunit beta-2 isoform X3
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1538 → 1857
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:859 → 904
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:597 → 638
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1219 → 1266
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:124 → 357
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1803 → 1874
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427778.1 → XP_038283706.1 laminin subunit beta-2 isoform X4
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1535 → 1854
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:850 → 895
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:588 → 629
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1216 → 1263
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:115 → 348
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1800 → 1871
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427776.1 → XP_038283704.1 laminin subunit beta-2 isoform X2
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1542 → 1861
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:857 → 902
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:595 → 636
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1223 → 1270
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:122 → 355
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1807 → 1878
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427781.1 → XP_038283709.1 laminin subunit beta-2 isoform X7
- UniProtKB/TrEMBL
-
A0A8C0R508
- Conserved Domains (6) summary
-
- smart00180
Location:745 → 790
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:483 → 524
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- TIGR02168
Location:1169 → 1758
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00053
Location:1111 → 1158
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:10 → 243
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1695 → 1766
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427779.1 → XP_038283707.1 laminin subunit beta-2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3Q3S5
- Related
- ENSCAFP00845038590.1, ENSCAFT00845049179.1
- Conserved Domains (6) summary
-
- PRK02224
Location:1520 → 1839
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:835 → 880
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:573 → 614
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1201 → 1248
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:100 → 333
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1785 → 1856
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038427782.1 → XP_038283710.1 laminin subunit beta-2 isoform X8
- UniProtKB/TrEMBL
-
A0A8C0R508
- Conserved Domains (6) summary
-
- smart00180
Location:631 → 676
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:369 → 410
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- TIGR02168
Location:1055 → 1644
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- pfam00053
Location:997 → 1044
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:2 → 129
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1581 → 1652
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049280.1 Alternate UMICH_Zoey_3.1
- Range
-
39759167..39786363
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038503457.1 → XP_038359385.1
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049761.1 Alternate UNSW_CanFamBas_1.0
- Range
-
40158837..40189873
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038630613.1 → XP_038486541.1
-
XM_038630608.1 → XP_038486536.1
-
XM_038630610.1 → XP_038486538.1
-
XM_038630611.1 → XP_038486539.1
-
XM_038630609.1 → XP_038486537.1
-
XM_038630614.1 → XP_038486542.1
-
XM_038630612.1 → XP_038486540.1
-
XM_038630615.1 → XP_038486543.1
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049241.1 Alternate UU_Cfam_GSD_1.0
- Range
-
40439108..40470170
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038566468.1 → XP_038422396.1 laminin subunit beta-2 isoform X6
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
-
XM_038566463.1 → XP_038422391.1 laminin subunit beta-2 isoform X1
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
-
XM_038566465.1 → XP_038422393.1 laminin subunit beta-2 isoform X3
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
-
XM_038566466.1 → XP_038422394.1 laminin subunit beta-2 isoform X4
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
-
XM_038566464.1 → XP_038422392.1 laminin subunit beta-2 isoform X2
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
-
XM_038566469.1 → XP_038422397.1 laminin subunit beta-2 isoform X7
- UniProtKB/TrEMBL
-
A0A8C0R508
-
XM_038566467.1 → XP_038422395.1 laminin subunit beta-2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3Q3S5
-
XM_038566470.1 → XP_038422398.1 laminin subunit beta-2 isoform X8
- UniProtKB/TrEMBL
-
A0A8C0R508
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
39949768..39980800
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038455991.1 → XP_038311919.1 laminin subunit beta-2 isoform X6
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1510 → 1829
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:825 → 870
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:563 → 604
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1191 → 1238
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:90 → 323
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1775 → 1846
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038455989.1 → XP_038311917.1 laminin subunit beta-2 isoform X1
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1544 → 1863
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:859 → 904
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:597 → 638
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1225 → 1272
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:124 → 357
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1809 → 1880
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_038455990.1 → XP_038311918.1 laminin subunit beta-2 isoform X3
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- PRK02224
Location:1538 → 1857
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:859 → 904
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:597 → 638
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1219 → 1266
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:124 → 357
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1803 → 1874
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_022406743.2 → XP_022262451.1 laminin subunit beta-2 isoform X4
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (6) summary
-
- smart00180
Location:850 → 895
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:588 → 629
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1216 → 1255
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:128 → 348
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam08614
Location:1277 → 1398
- ATG16; Autophagy protein 16 (ATG16)
- cl25732
Location:1535 → 1854
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_014121972.3 → XP_013977447.1 laminin subunit beta-2 isoform X2
- UniProtKB/TrEMBL
-
A0A8I3Q2E4
- Conserved Domains (7) summary
-
- smart00180
Location:857 → 902
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:595 → 636
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1223 → 1262
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:131 → 355
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam14346
Location:1524 → 1593
- DUF4398; Domain of unknown function (DUF4398)
- pfam16731
Location:1630 → 1845
- GARP; Glutamic acid/alanine-rich protein of Trypanosoma
- cl02193
Location:1660 → 1839
- VirB5_like; VirB5 protein family
-
XM_038455993.1 → XP_038311921.1 laminin subunit beta-2 isoform X7
- UniProtKB/TrEMBL
-
A0A8C0R508
- Conserved Domains (6) summary
-
- PRK02224
Location:1430 → 1749
- PRK02224; DNA double-strand break repair Rad50 ATPase
- smart00180
Location:745 → 790
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:483 → 524
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1111 → 1158
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:10 → 243
- Laminin_N; Laminin N-terminal (Domain VI)
- cd22299
Location:1695 → 1766
- cc_LAMB2_C; C-terminal coiled-coil domain found in laminin subunit beta-2 (LAMB2)
-
XM_005632554.4 → XP_005632611.1 laminin subunit beta-2 isoform X5
- UniProtKB/TrEMBL
-
A0A8I3Q3S5
- Conserved Domains (7) summary
-
- smart00180
Location:835 → 880
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:573 → 614
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:1201 → 1240
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:109 → 333
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam14346
Location:1502 → 1571
- DUF4398; Domain of unknown function (DUF4398)
- pfam16731
Location:1608 → 1823
- GARP; Glutamic acid/alanine-rich protein of Trypanosoma
- cl02193
Location:1638 → 1817
- VirB5_like; VirB5 protein family
-
XM_005632555.2 → XP_005632612.1 laminin subunit beta-2 isoform X8
- UniProtKB/TrEMBL
-
A0A8C0R508
- Conserved Domains (7) summary
-
- smart00180
Location:631 → 676
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:369 → 410
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00053
Location:997 → 1036
- Laminin_EGF; Laminin EGF domain
- pfam00055
Location:2 → 129
- Laminin_N; Laminin N-terminal (Domain VI)
- pfam14346
Location:1298 → 1367
- DUF4398; Domain of unknown function (DUF4398)
- pfam16731
Location:1404 → 1619
- GARP; Glutamic acid/alanine-rich protein of Trypanosoma
- cl02193
Location:1434 → 1613
- VirB5_like; VirB5 protein family