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MEX3C mex-3 RNA binding family member C [ Canis lupus familiaris (dog) ]

Gene ID: 476195, updated on 5-Mar-2024

Summary

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Official Symbol
MEX3Cprovided by VGNC
Official Full Name
mex-3 RNA binding family member Cprovided by VGNC
Primary source
VGNC:VGNC:43185
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
RKHD2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (23709603..23730449)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (24805803..24825631)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (23770888..23790686)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (23657154..23677248)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119870724 Neighboring gene uncharacterized LOC119870726 Neighboring gene SMAD family member 4 Neighboring gene elaC ribonuclease Z 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
RNA-binding E3 ubiquitin-protein ligase MEX3C; LOW QUALITY PROTEIN: RNA-binding E3 ubiquitin-protein ligase MEX3C
Names
mex-3 homolog C
ring finger and KH domain containing 2
XP_022272603.2
XP_038324678.1
XP_038445818.1
XP_038509506.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    23709603..23730449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038653578.1 → XP_038509506.1  RNA-binding E3 ubiquitin-protein ligase MEX3C isoform X1

    Conserved Domains (4) summary
    PRK07003
    Location:42 → 232
    PRK07003; DNA polymerase III subunit gamma/tau
    cd16518
    Location:772 → 812
    RING-HC_MEX3; RING finger, HC subclass, found in RNA-binding proteins of the evolutionarily-conserved MEX-3 family
    cd22423
    Location:396 → 468
    KH-I_MEX3_rpt1; first type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins
    cd22424
    Location:488 → 559
    KH-I_MEX3_rpt2; second type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    23770888..23790686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038468750.1 → XP_038324678.1  RNA-binding E3 ubiquitin-protein ligase MEX3C isoform X2

    Conserved Domains (3) summary
    cd16518
    Location:569 → 609
    RING-HC_MEX3; RING finger, HC subclass, found in RNA-binding proteins of the evolutionarily-conserved MEX-3 family
    cd22423
    Location:193 → 265
    KH-I_MEX3_rpt1; first type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins
    cd22424
    Location:285 → 356
    KH-I_MEX3_rpt2; second type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    23657154..23677248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038589890.1 → XP_038445818.1  LOW QUALITY PROTEIN: RNA-binding E3 ubiquitin-protein ligase MEX3C isoform X3

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    24805803..24825631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022416895.2 → XP_022272603.2  RNA-binding E3 ubiquitin-protein ligase MEX3C isoform X4

    UniProtKB/TrEMBL
    A0A8C0YWS9, A0A8P0N3J1
    Conserved Domains (3) summary
    cd16518
    Location:569 → 609
    RING-HC_MEX3; RING finger, HC subclass, found in RNA-binding proteins of the evolutionarily-conserved MEX-3 family
    cd22423
    Location:193 → 265
    KH-I_MEX3_rpt1; first type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins
    cd22424
    Location:285 → 356
    KH-I_MEX3_rpt2; second type I K homology (KH) RNA-binding domain found in the family of MEX-3 RNA-binding proteins
Nucleotide Protein
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