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DDB1 damage specific DNA binding protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 476067, updated on 25-Jul-2026
Official Symbol
DDB1provided by VGNC
Official Full Name
damage specific DNA binding protein 1provided by VGNC
Primary source
VGNC:VGNC:39829
See related
Ensembl:ENSCAFG00845012984 RGD:12356946
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
all
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See DDB1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
27
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (56112716..56145419)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (53637465..53670146)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (55673233..55706147)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (55170743..55203394)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (54792588..54825289)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene cytochrome b561 family member A3 Neighboring gene triokinase and FMN cyclase Neighboring gene von Willebrand factor C and EGF domains Neighboring gene pepsinogen 5, group I (pepsinogen A)

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
DNA damage-binding protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    56112716..56145419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425447.1 → XP_038281375.1  DNA damage-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0KI40, A0A8I3NKI4, A0A8I3RZS2
    Related
    ENSCAFP00845018193.1, ENSCAFT00845023200.1
    Conserved Domains (2) summary
    pfam03178
    Location:791 → 1099
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:75 → 543
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    55170743..55203394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501684.1 → XP_038357612.1  

    Conserved Domains (2) summary
    pfam03178
    Location:791 → 1099
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:75 → 543
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    54792588..54825289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038628532.1 → XP_038484460.1  

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    55673233..55706147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038564409.1 → XP_038420337.1  DNA damage-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0KI40, A0A8I3NKI4, A0A8I3RZS2
    Conserved Domains (2) summary
    pfam03178
    Location:791 → 1099
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:75 → 543
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    53637465..53670146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_533275.7 → XP_533275.2  DNA damage-binding protein 1

    See identical proteins and their annotated locations for XP_533275.2

    UniProtKB/TrEMBL
    A0A8C0KI40, A0A8I3NKI4, A0A8I3RZS2
    Conserved Domains (2) summary
    pfam03178
    Location:791 → 1099
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:75 → 543
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term
Nucleotide Protein
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