U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AHNAK AHNAK nucleoprotein [ Canis lupus familiaris (dog) ]

Gene ID: 476059, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
AHNAKprovided by VGNC
Official Full Name
AHNAK nucleoproteinprovided by VGNC
Primary source
VGNC:VGNC:37728
See related
Ensembl:ENSCAFG00845009750
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (55136824..55169332)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (52690025..52721586)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (54603726..54636260)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (54234768..54266243)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (53807218..53839721)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111091013 Neighboring gene terminal uridylyl transferase 1, U6 snRNA-specific Neighboring gene eukaryotic translation elongation factor 1 gamma Neighboring gene uncharacterized LOC111091012 Neighboring gene uncharacterized LOC111091014 Neighboring gene secretoglobin family 1A member 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. AHNAK interaction with the annexin 2/S100A10 complex regulates cell membrane cytoarchitecture. Benaud C, et al. J Cell Biol, 2004 Jan 5. PMID 14699089, Free PMC Article
  2. Assembly of the β4-Integrin Interactome Based on Proximal Biotinylation in the Presence and Absence of Heterodimerization. Myllymäki SM, et al. Mol Cell Proteomics, 2019 Feb. PMID 30404858, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Interaction of AHNAK with the annexin 2/S100A10 regulates cortical actin cytoskeleton organization and cell membrane cytoarchitecture
    Title: AHNAK interaction with the annexin 2/S100A10 complex regulates cell membrane cytoarchitecture.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
neuroblast differentiation-associated protein AHNAK; LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    55136824..55169332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425333.1 → XP_038281261.1  neuroblast differentiation-associated protein AHNAK isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJ24, A0A8I3NCQ4
    Conserved Domains (2) summary
    COG2911
    Location:5416 → 5851
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  2. XM_038425335.1 → XP_038281263.1  neuroblast differentiation-associated protein AHNAK isoform X2

    UniProtKB/TrEMBL
    A0A8C0MJ24
    Conserved Domains (2) summary
    COG2911
    Location:5288 → 5723
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  3. XM_038425334.1 → XP_038281262.1  neuroblast differentiation-associated protein AHNAK isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJ24, A0A8I3NCQ4
    Related
    ENSCAFP00845013395.1, ENSCAFT00845017190.1
    Conserved Domains (2) summary
    COG2911
    Location:5416 → 5851
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    54234768..54266243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501603.1 → XP_038357531.1  LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    53807218..53839721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038628425.1 → XP_038484353.1  neuroblast differentiation-associated protein AHNAK isoform X1

  2. XM_038628428.1 → XP_038484356.1  neuroblast differentiation-associated protein AHNAK isoform X2

  3. XM_038628427.1 → XP_038484355.1  neuroblast differentiation-associated protein AHNAK isoform X3

  4. XM_038628429.1 → XP_038484357.1  neuroblast differentiation-associated protein AHNAK isoform X4

  5. XM_038628426.1 → XP_038484354.1  neuroblast differentiation-associated protein AHNAK isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    54603726..54636260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038564279.1 → XP_038420207.1  LOW QUALITY PROTEIN: neuroblast differentiation-associated protein AHNAK isoform X1

    UniProtKB/TrEMBL
    A0A8C0MJ24

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52690025..52721586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038454152.1 → XP_038310080.1  neuroblast differentiation-associated protein AHNAK isoform X5

    UniProtKB/TrEMBL
    A0A8P0TN04
    Conserved Domains (2) summary
    COG2911
    Location:4366 → 4801
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  2. XM_038454156.1 → XP_038310084.1  neuroblast differentiation-associated protein AHNAK isoform X8

    UniProtKB/TrEMBL
    A0A8P0TN04
    Conserved Domains (2) summary
    COG2911
    Location:4238 → 4673
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  3. XM_038454155.1 → XP_038310083.1  neuroblast differentiation-associated protein AHNAK isoform X7

    UniProtKB/TrEMBL
    A0A8P0TN04
    Conserved Domains (2) summary
    COG2911
    Location:4366 → 4801
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  4. XM_038454154.1 → XP_038310082.1  neuroblast differentiation-associated protein AHNAK isoform X6

    UniProtKB/TrEMBL
    A0A8P0TN04
    Conserved Domains (2) summary
    COG2911
    Location:4366 → 4801
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...

  5. XM_038454153.1 → XP_038310081.1  neuroblast differentiation-associated protein AHNAK isoform X5

    UniProtKB/TrEMBL
    A0A8P0TN04
    Conserved Domains (2) summary
    COG2911
    Location:4366 → 4801
    TamB; Autotransporter translocation and assembly factor TamB [Intracellular trafficking, secretion, and vesicular transport]
    cl00117
    Location:23 → 91
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous