Format

Send to:

Choose Destination

GGCX gamma-glutamyl carboxylase [ Canis lupus familiaris (dog) ]

Gene ID: 475769, updated on 24-Apr-2021

Summary

Official Symbol
GGCXprovided by VGNC
Official Full Name
gamma-glutamyl carboxylaseprovided by VGNC
Primary source
VGNC:VGNC:41197
See related
Ensembl:ENSCAFG00000007720
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GGCX in Genome Data Viewer
Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (40258976..40271953)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (39183664..39196637)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (39860352..39873319)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (39388607..39401574)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (39460505..39473477)
105 previous assembly CanFam3.1 (GCF_000002285.3) 17 NC_006599.3 (39512293..39525251)

Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene vesicle associated membrane protein 5 Neighboring gene vesicle associated membrane protein 8 Neighboring gene methionine adenosyltransferase 2A Neighboring gene SH2 domain containing 6

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
vitamin K-dependent gamma-carboxylase
XP_005630545.1
XP_013975851.1
XP_038354920.1
XP_038354921.1
XP_038354922.1
XP_038417507.1
XP_038417508.1
XP_038417509.1
XP_038481548.1
XP_038481549.1
XP_038481550.1
XP_038547469.1
XP_038547470.1
XP_038547471.1
XP_532979.3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051821.1 Reference ROS_Cfam_1.0

    Range
    40258976..40271953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038691541.1XP_038547469.1  vitamin K-dependent gamma-carboxylase isoform X1

    Conserved Domains (2) summary
    pfam05090
    Location:66504
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:512604
    cupin_RmlC-like; RmlC-like cupin superfamily
  2. XM_038691542.1XP_038547470.1  vitamin K-dependent gamma-carboxylase isoform X2

    Conserved Domains (2) summary
    pfam05090
    Location:33471
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:479571
    cupin_RmlC-like; RmlC-like cupin superfamily
  3. XM_038691543.1XP_038547471.1  vitamin K-dependent gamma-carboxylase isoform X3

    Conserved Domains (2) summary
    pfam05090
    Location:84407
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:415507
    cupin_RmlC-like; RmlC-like cupin superfamily

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049277.1 Alternate UMICH_Zoey_3.1

    Range
    39388607..39401574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038498992.1XP_038354920.1  vitamin K-dependent gamma-carboxylase isoform X1

    Conserved Domains (2) summary
    pfam05090
    Location:66504
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:512604
    cupin_RmlC-like; RmlC-like cupin superfamily
  2. XM_038498993.1XP_038354921.1  vitamin K-dependent gamma-carboxylase isoform X2

    Conserved Domains (2) summary
    pfam05090
    Location:33471
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:479571
    cupin_RmlC-like; RmlC-like cupin superfamily
  3. XM_038498994.1XP_038354922.1  vitamin K-dependent gamma-carboxylase isoform X3

    Conserved Domains (2) summary
    pfam05090
    Location:84407
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:415507
    cupin_RmlC-like; RmlC-like cupin superfamily

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

    Range
    39460505..39473477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038625620.1XP_038481548.1  vitamin K-dependent gamma-carboxylase isoform X1

    Conserved Domains (2) summary
    pfam05090
    Location:66504
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:512604
    cupin_RmlC-like; RmlC-like cupin superfamily
  2. XM_038625621.1XP_038481549.1  vitamin K-dependent gamma-carboxylase isoform X2

    Conserved Domains (2) summary
    pfam05090
    Location:33471
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:479571
    cupin_RmlC-like; RmlC-like cupin superfamily
  3. XM_038625622.1XP_038481550.1  vitamin K-dependent gamma-carboxylase isoform X3

    Conserved Domains (2) summary
    pfam05090
    Location:84407
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:415507
    cupin_RmlC-like; RmlC-like cupin superfamily

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

    Range
    39860352..39873319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038561579.1XP_038417507.1  vitamin K-dependent gamma-carboxylase isoform X1

    Conserved Domains (2) summary
    pfam05090
    Location:66504
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:512604
    cupin_RmlC-like; RmlC-like cupin superfamily
  2. XM_038561580.1XP_038417508.1  vitamin K-dependent gamma-carboxylase isoform X2

    Conserved Domains (2) summary
    pfam05090
    Location:33471
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:479571
    cupin_RmlC-like; RmlC-like cupin superfamily
  3. XM_038561581.1XP_038417509.1  vitamin K-dependent gamma-carboxylase isoform X3

    Conserved Domains (2) summary
    pfam05090
    Location:84407
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:415507
    cupin_RmlC-like; RmlC-like cupin superfamily

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    39183664..39196637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_532979.7XP_532979.3  vitamin K-dependent gamma-carboxylase isoform X1

    Related
    ENSCAFP00000057679.1
    Conserved Domains (2) summary
    pfam05090
    Location:66504
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:512604
    cupin_RmlC-like; RmlC-like cupin superfamily
  2. XM_005630488.4XP_005630545.1  vitamin K-dependent gamma-carboxylase isoform X2

    Related
    ENSCAFP00000048819.1
    Conserved Domains (2) summary
    pfam05090
    Location:33471
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:479571
    cupin_RmlC-like; RmlC-like cupin superfamily
  3. XM_014120376.3XP_013975851.1  vitamin K-dependent gamma-carboxylase isoform X3

    Conserved Domains (2) summary
    pfam05090
    Location:84407
    VKG_Carbox; Vitamin K-dependent gamma-carboxylase
    cl40423
    Location:415507
    cupin_RmlC-like; RmlC-like cupin superfamily
Support Center