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TVAGG3_0162300 negative regulation of ER-associated ubiquitin-dependent protein catabolic process [ Trichomonas vaginalis G3 ]

Gene ID: 4757032, updated on 23-Nov-2023

Summary

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Gene symbol
TVAGG3_0162300
Gene description
negative regulation of ER-associated ubiquitin-dependent protein catabolic process
Locus tag
TVAGG3_0162300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
Lineage
Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
Old locus tag
TVAG_2v0162300
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Genomic context

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Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_067206.1 (24789210..24790479, complement)

Chromosome IV - NC_067206.1Genomic Context describing neighboring genes Neighboring gene WD40 repeat-like family Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene serine threonine-protein phosphatase family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067206.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • replaces TrichDB:TVAG_296140

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteasomal protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
negative regulation of ER-associated ubiquitin-dependent protein catabolic process
XP_001312160.1
  • eggNOG seed ortholog:5722.XP_001312160.1;replaces TrichDB:TVAG_296140

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067206.1 Reference assembly

    Range
    24789210..24790479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001312159.2 → XP_001312160.1  negative regulation of ER-associated ubiquitin-dependent protein catabolic process [Trichomonas vaginalis G3]

    See identical proteins and their annotated locations for XP_001312160.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A2F763
    Conserved Domains (3) summary
    cd01769
    Location:3 → 71
    UBL; Ubiquitin-like domain of UBL
    cl02553
    Location:105 → 405
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:104 → 405
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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