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PDE1C phosphodiesterase 1C [ Canis lupus familiaris (dog) ]

Gene ID: 475272, updated on 18-Sep-2020

Summary

Official Symbol
PDE1Cprovided by VGNC
Official Full Name
phosphodiesterase 1Cprovided by VGNC
Primary source
VGNC:VGNC:44350
See related
Ensembl:ENSCAFG00000003133
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See PDE1C in Genome Data Viewer
Location:
chromosome: 14
Exon count:
26
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 14 NC_006596.3 (44250612..44543818, complement)

Chromosome 14 - NC_006596.3Genomic Context describing neighboring genes Neighboring gene ITPR interacting domain containing 1 Neighboring gene protein phosphatase 1 regulatory subunit 17 Neighboring gene uncharacterized LOC102155012 Neighboring gene ATP synthase subunit d, mitochondrial pseudogene Neighboring gene ribose-phosphate pyrophosphokinase 2-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006596.3 Chromosome 14 Reference CanFam3.1 Primary Assembly

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
XP_005628751.1
XP_005628752.1
XP_005628753.1
XP_005628754.1
XP_013974473.1
XP_013974474.1
XP_022283256.1
XP_022283257.1
XP_022283258.1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006596.3 Reference CanFam3.1 Primary Assembly

    Range
    44250612..44543818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022427548.1XP_022283256.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X1

    Related
    ENSCAFP00000057432.1, ENSCAFT00000088842.1
    Conserved Domains (3) summary
    pfam00233
    Location:227445
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:86142
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
    cl26511
    Location:543636
    Neuromodulin_N; Gap junction protein N-terminal region
  2. XM_022427549.1XP_022283257.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X2

    Related
    ENSCAFP00000004679.4, ENSCAFT00000005046.5
    Conserved Domains (3) summary
    pfam00233
    Location:218436
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:77133
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
    cl26511
    Location:534627
    Neuromodulin_N; Gap junction protein N-terminal region
  3. XM_022427550.1XP_022283258.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X3

    Related
    ENSCAFP00000061607.1, ENSCAFT00000088597.1
    Conserved Domains (3) summary
    pfam00233
    Location:200418
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:59115
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
    cl26511
    Location:516609
    Neuromodulin_N; Gap junction protein N-terminal region
  4. XM_014118999.2XP_013974474.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X7

    Conserved Domains (2) summary
    pfam00233
    Location:114342
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:129
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
  5. XM_014118998.2XP_013974473.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X7

    Conserved Domains (2) summary
    pfam00233
    Location:114342
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:129
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
  6. XM_005628694.3XP_005628751.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X4

    Related
    ENSCAFP00000050400.1, ENSCAFT00000063901.1
    Conserved Domains (2) summary
    pfam00233
    Location:188416
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:47103
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
  7. XM_005628696.3XP_005628753.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5

    See identical proteins and their annotated locations for XP_005628753.1

    UniProtKB/TrEMBL
    E2R3P9
    Conserved Domains (2) summary
    pfam00233
    Location:227455
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:86142
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
  8. XM_005628695.3XP_005628752.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X5

    See identical proteins and their annotated locations for XP_005628752.1

    UniProtKB/TrEMBL
    E2R3P9
    Related
    ENSCAFP00000052176.1, ENSCAFT00000087095.1
    Conserved Domains (2) summary
    pfam00233
    Location:227455
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:86142
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
  9. XM_005628697.3XP_005628754.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X6

    Conserved Domains (2) summary
    pfam00233
    Location:227455
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:86142
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
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