Format

Send to:

Choose Destination

COPG2 coatomer protein complex subunit gamma 2 [ Canis lupus familiaris (dog) ]

Gene ID: 475189, updated on 26-Sep-2018

Summary

Official Symbol
COPG2provided by VGNC
Official Full Name
coatomer protein complex subunit gamma 2provided by VGNC
Primary source
VGNC:VGNC:39508
See related
Ensembl:ENSCAFG00000001426
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs

Genomic context

See COPG2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
34
Annotation release Status Assembly Chr Location
105 current CanFam3.1 (GCF_000002285.3) 14 NC_006596.3 (6334407..6435789)

Chromosome 14 - NC_006596.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106559682 Neighboring gene uncharacterized LOC111098726 Neighboring gene Kruppel like factor 14 Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP3 pseudogene Neighboring gene microRNA 335 Neighboring gene mesoderm specific transcript Neighboring gene glutathione S-transferase P pseudogene Neighboring gene centrosomal protein 41

Genomic regions, transcripts, and products

Genomic Sequence:
NC_006596.3 Chromosome 14 Reference CanFam3.1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CanFam3.1 Primary Assembly

Genomic

  1. NC_006596.3 Reference CanFam3.1 Primary Assembly

    Range
    6334407..6435789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022427205.1XP_022282913.1  coatomer subunit gamma-2 isoform X1

    Conserved Domains (3) summary
    sd00044
    Location:625650
    HEAT; HEAT repeat [structural motif]
    pfam14994
    Location:31241
    TSGA13; Testis-specific gene 13 protein
    cl26699
    Location:2371093
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
  2. XM_022427206.1XP_022282914.1  coatomer subunit gamma-2 isoform X2

    Conserved Domains (3) summary
    sd00044
    Location:612637
    HEAT; HEAT repeat [structural motif]
    pfam14994
    Location:31228
    TSGA13; Testis-specific gene 13 protein
    cl26699
    Location:2241080
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
  3. XM_022427207.1XP_022282915.1  coatomer subunit gamma-2 isoform X4

    Conserved Domains (3) summary
    sd00044
    Location:556581
    HEAT; HEAT repeat [structural motif]
    pfam14994
    Location:31172
    TSGA13; Testis-specific gene 13 protein
    cl26699
    Location:1681024
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
  4. XM_005628372.3XP_005628429.1  coatomer subunit gamma-2 isoform X3

    Conserved Domains (6) summary
    COG5240
    Location:2141070
    SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
    pfam08752
    Location:817960
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
    pfam11701
    Location:529701
    UNC45-central; Myosin-binding striated muscle assembly central
    pfam14994
    Location:3218
    TSGA13; Testis-specific gene 13 protein
    pfam16381
    Location:9621074
    Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
    sd00044
    Location:602627
    HEAT; HEAT repeat [structural motif]
  5. XM_005628374.3XP_005628431.1  coatomer subunit gamma-2 isoform X5

    Conserved Domains (6) summary
    COG5240
    Location:90946
    SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
    pfam08752
    Location:693836
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
    pfam11701
    Location:405577
    UNC45-central; Myosin-binding striated muscle assembly central
    pfam14994
    Location:494
    TSGA13; Testis-specific gene 13 protein
    pfam16381
    Location:838950
    Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
    sd00044
    Location:478503
    HEAT; HEAT repeat [structural motif]
  6. XM_022427208.1XP_022282916.1  coatomer subunit gamma-2 isoform X6

    Related
    ENSCAFP00000002070.3, ENSCAFT00000002234.3
    Conserved Domains (3) summary
    sd00044
    Location:460485
    HEAT; HEAT repeat [structural motif]
    pfam14994
    Location:176
    TSGA13; Testis-specific gene 13 protein
    cl26699
    Location:72928
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
  7. XM_532421.6XP_532421.4  coatomer subunit gamma-2 isoform X7

    Conserved Domains (5) summary
    COG5240
    Location:48908
    SEC21; Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion]
    pfam08752
    Location:655798
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
    pfam11701
    Location:367539
    UNC45-central; Myosin-binding striated muscle assembly central
    pfam16381
    Location:800912
    Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
    sd00044
    Location:440465
    HEAT; HEAT repeat [structural motif]
Support Center