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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051817.1 Reference ROS_Cfam_1.0
- Range
-
38320076..38331667 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038685371.1 → XP_038541299.1 tonsoku-like protein isoform X1
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Conserved Domains (7) summary
-
- PHA03247
Location:702 → 945
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:1031 → 1051
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:559 → 589
- ANK; ANK repeat [structural motif]
- pfam12796
Location:563 → 657
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1033 → 1296
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_038685373.1 → XP_038541301.1 tonsoku-like protein isoform X3
- UniProtKB/TrEMBL
-
A0A8I3NCG1
- Conserved Domains (8) summary
-
- PHA03247
Location:481 → 724
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:9 → 197
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:810 → 830
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:95 → 118
- TPR; TPR repeat [structural motif]
- sd00045
Location:338 → 368
- ANK; ANK repeat [structural motif]
- pfam13424
Location:95 → 161
- TPR_12; Tetratricopeptide repeat
- pfam12796
Location:342 → 436
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:812 → 1075
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_038685372.1 → XP_038541300.1 tonsoku-like protein isoform X2
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Related
- ENSCAFP00845015114.1, ENSCAFT00845019332.1
- Conserved Domains (7) summary
-
- PHA03247
Location:669 → 912
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:998 → 1018
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:526 → 556
- ANK; ANK repeat [structural motif]
- pfam12796
Location:530 → 624
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1000 → 1263
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
RNA
-
XR_005436658.1 RNA Sequence
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049273.1 Alternate UMICH_Zoey_3.1
- Range
-
38011918..38023454 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038493531.1 → XP_038349459.1
-
XM_038493533.1 → XP_038349461.1
-
XM_038493532.1 → XP_038349460.1
RNA
-
XR_005335151.1 RNA Sequence
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049754.1 Alternate UNSW_CanFamBas_1.0
- Range
-
38120565..38132086 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038619761.1 → XP_038475689.1
-
XM_038619763.1 → XP_038475691.1
-
XM_038619762.1 → XP_038475690.1
RNA
-
XR_005403214.1 RNA Sequence
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049234.1 Alternate UU_Cfam_GSD_1.0
- Range
-
38596909..38608509 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038555847.1 → XP_038411775.1 tonsoku-like protein isoform X1
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Conserved Domains (7) summary
-
- PHA03247
Location:702 → 945
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:1031 → 1051
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:559 → 589
- ANK; ANK repeat [structural motif]
- pfam12796
Location:563 → 657
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1033 → 1296
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_038555849.1 → XP_038411777.1 tonsoku-like protein isoform X3
- UniProtKB/TrEMBL
-
A0A8I3NCG1
- Conserved Domains (8) summary
-
- PHA03247
Location:481 → 724
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:9 → 197
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:810 → 830
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:95 → 118
- TPR; TPR repeat [structural motif]
- sd00045
Location:338 → 368
- ANK; ANK repeat [structural motif]
- pfam13424
Location:95 → 161
- TPR_12; Tetratricopeptide repeat
- pfam12796
Location:342 → 436
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:812 → 1075
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_038555848.1 → XP_038411776.1 tonsoku-like protein isoform X2
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Conserved Domains (7) summary
-
- PHA03247
Location:669 → 912
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:998 → 1018
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:526 → 556
- ANK; ANK repeat [structural motif]
- pfam12796
Location:530 → 624
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1000 → 1263
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
RNA
-
XR_005368932.1 RNA Sequence
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
37807109..37818700 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038427292.1 → XP_038283220.1 tonsoku-like protein isoform X1
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Conserved Domains (7) summary
-
- PHA03247
Location:702 → 945
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:1031 → 1051
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:559 → 589
- ANK; ANK repeat [structural motif]
- pfam12796
Location:563 → 657
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1033 → 1296
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_038427313.1 → XP_038283241.1 tonsoku-like protein isoform X3
- UniProtKB/TrEMBL
-
A0A8I3NCG1
- Conserved Domains (8) summary
-
- PHA03247
Location:481 → 724
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:9 → 197
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:810 → 830
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:95 → 118
- TPR; TPR repeat [structural motif]
- sd00045
Location:338 → 368
- ANK; ANK repeat [structural motif]
- pfam13424
Location:95 → 161
- TPR_12; Tetratricopeptide repeat
- pfam12796
Location:342 → 436
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:812 → 1075
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
-
XM_014118850.3 → XP_013974325.1 tonsoku-like protein isoform X2
- UniProtKB/TrEMBL
-
A0A8I3NHN2
- Conserved Domains (7) summary
-
- PHA03247
Location:669 → 912
- PHA03247; large tegument protein UL36; Provisional
- COG0457
Location:5 → 271
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00033
Location:998 → 1018
- LRR_RI; leucine-rich repeat [structural motif]
- sd00006
Location:316 → 339
- TPR; TPR repeat [structural motif]
- sd00045
Location:526 → 556
- ANK; ANK repeat [structural motif]
- pfam12796
Location:530 → 624
- Ank_2; Ankyrin repeats (3 copies)
- cl39015
Location:1000 → 1263
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
RNA
-
XR_005297873.1 RNA Sequence