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RPS27A ribosomal protein S27a [ Canis lupus familiaris (dog) ]

Gene ID: 474599, updated on 12-Feb-2021

Summary

Official Symbol
RPS27Aprovided by VGNC
Official Full Name
ribosomal protein S27aprovided by VGNC
Primary source
VGNC:VGNC:54540
See related
Ensembl:ENSCAFG00000023471
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See RPS27A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (57136975..57139378)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (56089650..56092053)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (57407860..57410263)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (56838149..56840545)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (57117379..57119782)
105 previous assembly CanFam3.1 (GCF_000002285.3) 10 NC_006592.3 (56132924..56135327)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119873779 Neighboring gene clathrin heavy chain linker domain containing 1 Neighboring gene mitochondrial translational initiation factor 2 Neighboring gene prolyl-tRNA synthetase associated domain-containing protein 1 Neighboring gene coiled-coil domain containing 88A

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
ubiquitin-40S ribosomal protein S27a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001252228.1NP_001239157.1  ubiquitin-40S ribosomal protein S27a

    See identical proteins and their annotated locations for NP_001239157.1

    Status: VALIDATED

    Source sequence(s)
    GR889329
    UniProtKB/TrEMBL
    F1PEZ4
    Related
    ENSCAFP00000031429.2, ENSCAFT00000036091.3
    Conserved Domains (2) summary
    cd01803
    Location:176
    Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    pfam01599
    Location:103147
    Ribosomal_S27; Ribosomal protein S27a

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    57136975..57139378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    56838149..56840545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    57117379..57119782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    57407860..57410263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    56089650..56092053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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