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TTTY17C testis-specific transcript, Y-linked 17C [ Homo sapiens (human) ]

Gene ID: 474152, updated on 23-Nov-2021

Summary

Official Symbol
TTTY17Cprovided by HGNC
Official Full Name
testis-specific transcript, Y-linked 17Cprovided by HGNC
Primary source
HGNC:HGNC:31890
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00142
Summary
There are three copies of this gene on chromosome Y. This record represents the most telomeric copy, which is within the P1 palindrome. [provided by RefSeq, Jul 2008]
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Genomic context

See TTTY17C in Genome Data Viewer
Location:
Yq11.23
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) Y NC_000024.10 (25183643..25184773, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (27329790..27330920, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene zinc finger protein 736 pseudogene 4, Y-linked Neighboring gene tripartite motif containing 60 pseudogene 12, Y-linked Neighboring gene RNA binding motif protein Y-linked family 2 member Y, pseudogene Neighboring gene ribosomal protein L41 pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • testis-specific transcript, Y-linked 17, telomeric
  • testis-specific transcript, Y-linked 17C (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_004755.2 

    Range
    3372757..3373887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_002179.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC006386

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p13 Primary Assembly

    Range
    25183643..25184773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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