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PLAT plasminogen activator, tissue type [ Pan troglodytes (chimpanzee) ]

Gene ID: 472748, updated on 12-Apr-2023

Summary

Official Symbol
PLATprovided by VGNC
Official Full Name
plasminogen activator, tissue typeprovided by VGNC
Primary source
VGNC:VGNC:3003
Locus tag
CK820_G0013033
See related
Ensembl:ENSPTRG00000020201
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See PLAT in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (54056425..54074538, complement)

Chromosome 8 - NC_072406.1Genomic Context describing neighboring genes Neighboring gene lysine acetyltransferase 6A Neighboring gene small nucleolar RNA SNORD112 Neighboring gene adaptor related protein complex 3 subunit mu 2 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC129135606

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072406.1 Chromosome 8 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
tissue-type plasminogen activator
XP_003311748.1
XP_528120.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072406.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    54056425..54074538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003311700.5XP_003311748.1  tissue-type plasminogen activator isoform X2

    See identical proteins and their annotated locations for XP_003311748.1

    UniProtKB/TrEMBL
    A0A2J8N7A9, A0A2R8ZEM4, A0A6D2X8A6
    Related
    ENSPTRP00000064409.1
    Conserved Domains (4) summary
    cd00108
    Location:79163
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    cd00190
    Location:267513
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam00008
    Location:4071
    EGF; EGF-like domain
    pfam00051
    Location:169250
    Kringle; Kringle domain
  2. XM_528120.7XP_528120.3  tissue-type plasminogen activator isoform X1

    See identical proteins and their annotated locations for XP_528120.3

    UniProtKB/TrEMBL
    A0A2R8ZEK6, A0A8I3B0K3, H2QW33, K7ATB3
    Related
    ENSPTRP00000061558.1
    Conserved Domains (5) summary
    smart00058
    Location:4183
    FN1; Fibronectin type 1 domain
    cd00108
    Location:125209
    KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
    cd00190
    Location:313559
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam00008
    Location:86117
    EGF; EGF-like domain
    pfam00051
    Location:215296
    Kringle; Kringle domain