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PNPLA8 patatin like phospholipase domain containing 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 472484, updated on 12-Apr-2023

Summary

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Official Symbol
PNPLA8provided by VGNC
Official Full Name
patatin like phospholipase domain containing 8provided by VGNC
Primary source
VGNC:VGNC:4472
Locus tag
CK820_G0011899
See related
Ensembl:ENSPTRG00000019590
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PNPLA8 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (117916489..117959984, complement)

Chromosome 7 - NC_072405.1Genomic Context describing neighboring genes Neighboring gene laminin subunit beta 4 Neighboring gene neuronal cell adhesion molecule Neighboring gene U7 small nuclear RNA Neighboring gene 60S ribosomal protein L7-like Neighboring gene DnaJ heat shock protein family (Hsp40) member B9 Neighboring gene THAP domain containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072405.1 Chromosome 7 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
calcium-independent phospholipase A2-gamma
XP_003951157.1
XP_009452254.1
XP_016813515.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072405.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    117916489..117959984 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003951108.5 → XP_003951157.1  calcium-independent phospholipase A2-gamma isoform X2

    See identical proteins and their annotated locations for XP_003951157.1

    UniProtKB/TrEMBL
    A0A2J8QXU8, A0A2R9ACS2, A0A6D2Y026, H2QV86
    Related
    ENSPTRP00000033545.4
    Conserved Domains (1) summary
    cd07211
    Location:435 → 741
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  2. XM_009453979.4 → XP_009452254.1  calcium-independent phospholipase A2-gamma isoform X1

    See identical proteins and their annotated locations for XP_009452254.1

    Conserved Domains (1) summary
    cd07211
    Location:435 → 752
    Pat_PNPLA8; Patatin-like phospholipase domain containing protein 8

  3. XM_016958026.3 → XP_016813515.1  calcium-independent phospholipase A2-gamma isoform X3

    Conserved Domains (1) summary
    cl11396
    Location:435 → 637
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

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