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HTR1E 5-hydroxytryptamine receptor 1E [ Pan troglodytes (chimpanzee) ]

Gene ID: 472064, updated on 17-Aug-2024
Official Symbol
HTR1Eprovided by VGNC
Official Full Name
5-hydroxytryptamine receptor 1Eprovided by VGNC
Primary source
VGNC:VGNC:7895
Locus tag
CK820_G0000812
See related
Ensembl:ENSPTRG00000029524
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
5-HT1E; 5-HT-1E
Orthologs
human all
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See HTR1E in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (98929529..99010923)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (98928013..99009407)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-1A-like Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like Neighboring gene uncharacterized LOC134810206 Neighboring gene small integral membrane protein 30 Neighboring gene glycoprotein hormones, alpha polypeptide

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Human-specific amino acid changes found in 103 protein-coding genes. Kitano T, et al. Mol Biol Evol, 2004 May. PMID 15014171
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenylate cyclase-inhibiting serotonin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
5-hydroxytryptamine receptor 1E
Names
5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled
Serotonin receptor 1E

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    98929529..99010923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016955971.3 → XP_016811460.1  5-hydroxytryptamine receptor 1E

    UniProtKB/Swiss-Prot
    Q9N2B6
    UniProtKB/TrEMBL
    A0A2J8PVF1, A0A6D2XVG5, H2RC98
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_003311375.4 → XP_003311423.1  5-hydroxytryptamine receptor 1E

    See identical proteins and their annotated locations for XP_003311423.1

    UniProtKB/Swiss-Prot
    Q9N2B6
    UniProtKB/TrEMBL
    A0A2J8PVF1, A0A6D2XVG5, H2RC98
    Related
    ENSPTRP00000056988.2
    Conserved Domains (1) summary
    cd15335
    Location:23 → 355
    7tmA_5-HT1E; serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9N2B6.1 GenPept UniProtKB/Swiss-Prot:Q9N2B6

Gene LinkOut

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Molecular Biology Databases
Research Materials