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HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase [ Pan troglodytes (chimpanzee) ]

Gene ID: 471516, updated on 3-Dec-2024
Official Symbol
HMGCRprovided by VGNC
Official Full Name
3-hydroxy-3-methylglutaryl-CoA reductaseprovided by VGNC
Primary source
VGNC:VGNC:4034
Locus tag
CK820_G0009437
See related
Ensembl:ENSPTRG00000016994
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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See HMGCR in Genome Data Viewer
Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (40675556..40699812, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (41094559..41118806, complement)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene U7 small nuclear RNA Neighboring gene DNA polymerase kappa Neighboring gene ceramide transporter 1 Neighboring gene ankyrin repeat domain 31 Neighboring gene glucosaminyl (N-acetyl) transferase 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroxymethylglutaryl-CoA reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
3-hydroxy-3-methylglutaryl-Coenzyme A reductase

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    40675556..40699812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016953130.4 → XP_016808619.4  3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X1

    UniProtKB/TrEMBL
    A0A2J8NNH7, A0A8I3B1V8, K7B808, K7C0P4, K7CRR5

  2. XM_016953132.4 → XP_016808621.4  3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X2

    UniProtKB/TrEMBL
    A0A2J8NNG0, H2QR35, K7BUP5

  3. XM_063810348.1 → XP_063666418.1  3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X1

    UniProtKB/TrEMBL
    A0A2J8NNH7, A0A8I3B1V8, K7B808, K7C0P4, K7CRR5

  4. XM_054685018.2 → XP_054540993.2  3-hydroxy-3-methylglutaryl-Coenzyme A reductase isoform X1

    UniProtKB/TrEMBL
    A0A2J8NNH7, A0A8I3B1V8, K7B808, K7C0P4, K7CRR5
Nucleotide Protein
Heading Accession and Version

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