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IL1A interleukin 1 alpha [ Pan troglodytes (chimpanzee) ]

Gene ID: 470485, updated on 29-Mar-2024

Summary

Official Symbol
IL1Aprovided by VGNC
Official Full Name
interleukin 1 alphaprovided by VGNC
Primary source
VGNC:VGNC:1939
Locus tag
CK820_G0052785
See related
Ensembl:ENSPTRG00000012371
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See IL1A in Genome Data Viewer
Location:
chromosome: 2A
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (10486873..10496951)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (112002032..112012129, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene interleukin 36 gamma Neighboring gene uncharacterized LOC112208185 Neighboring gene interleukin 1 beta Neighboring gene cytoskeleton associated protein 2 like Neighboring gene 5'-nucleotidase domain containing 4

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables interleukin-1 receptor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    10486873..10496951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_525866.4XP_525866.1  interleukin-1 alpha

    See identical proteins and their annotated locations for XP_525866.1

    UniProtKB/TrEMBL
    A0A2J8IVU7, A0A6D2XGP0, H2QIK5
    Related
    ENSPTRP00000021189.3
    Conserved Domains (2) summary
    smart00125
    Location:129267
    IL1; Interleukin-1 homologues
    pfam02394
    Location:1108
    IL1_propep; Interleukin-1 propeptide