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PNPLA5 patatin like phospholipase domain containing 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 470234, updated on 3-Apr-2024

Summary

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Official Symbol
PNPLA5provided by VGNC
Official Full Name
patatin like phospholipase domain containing 5provided by VGNC
Primary source
VGNC:VGNC:6021
Locus tag
CK820_G0027441
See related
Ensembl:ENSPTRG00000014478
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 23 NC_086016.1 (45876506..45888923, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 22 NC_072420.1 (38905226..38921326, complement)

Chromosome 23 - NC_086016.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 6 Neighboring gene uncharacterized LOC107970264 Neighboring gene sulfotransferase family 4A member 1 Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene patatin like phospholipase domain containing 3 Neighboring gene SAMM50 sorting and assembly machinery component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triglyceride lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 5
XP_054531909.1
XP_054531910.1
XP_525619.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086016.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    45876506..45888923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_525619.8 → XP_525619.5  patatin-like phospholipase domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    H2QLV2

  2. XM_054675934.2 → XP_054531909.1  patatin-like phospholipase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    H2QLV2

  3. XM_054675935.2 → XP_054531910.1  patatin-like phospholipase domain-containing protein 5 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
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