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PYGB glycogen phosphorylase B [ Pan troglodytes (chimpanzee) ]

Gene ID: 469908, updated on 29-Mar-2024

Summary

Official Symbol
PYGBprovided by VGNC
Official Full Name
glycogen phosphorylase Bprovided by VGNC
Primary source
VGNC:VGNC:57990
Locus tag
CK820_G0035261
See related
Ensembl:ENSPTRG00000049662
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See PYGB in Genome Data Viewer
Location:
chromosome: 20
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (31780480..31832447)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (31812228..31864195)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107969977 Neighboring gene ectonucleoside triphosphate diphosphohydrolase 6 Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene GINS complex subunit 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
glycogen phosphorylase, brain form
Names
brain glycogen phosphorylase
phosphorylase, glycogen; brain
XP_016793073.1
XP_063658693.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    31780480..31832447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016937584.3XP_016793073.1  glycogen phosphorylase, brain form isoform X1

    UniProtKB/TrEMBL
    A0A2J8KX58, A0A6D2X7R6, K7B901, K7DI46
    Related
    ENSPTRP00000076147.1
    Conserved Domains (1) summary
    cd04300
    Location:29828
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins
  2. XM_063802623.1XP_063658693.1  glycogen phosphorylase, brain form isoform X2

RNA

  1. XR_010154085.1 RNA Sequence