DENND1B DENN domain containing 1B [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: DENND1Bprovided by VGNC
Official Full Name: DENN domain containing 1Bprovided by VGNC
Primary source: VGNC:VGNC:10598
Locus tag: CK820_G0038771
See related: Ensembl:ENSPTRG00000034501
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 25

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	1	NC_072398.2 (51332550..51590081)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	1	NC_072398.1 (179755029..179898630, complement)

Chromosome 1 - NC_072398.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

SHGC-147965 (e-PCR)
- UniSTS:176128

SHGC-76078 (e-PCR)
- UniSTS:74783

SHGC-31318 (e-PCR)
- UniSTS:33823

RH121182 (e-PCR)
- UniSTS:134176

SHGC-76091 (e-PCR)
- UniSTS:48675

G34825 (e-PCR)
- UniSTS:50219

SHGC-106387 (e-PCR)
- UniSTS:169781

SHGC-85144 (e-PCR)
- UniSTS:103997

G22405 (e-PCR)
- UniSTS:51049

AL009933 (e-PCR)
- UniSTS:7791

SHGC-76092 (e-PCR)
- UniSTS:75119

SHGC-80906 (e-PCR)
- UniSTS:102545

NoName (e-PCR)
- UniSTS:481947

D1S1580 (e-PCR)
- UniSTS:62378

SHGC-78059 (e-PCR)
- UniSTS:101586

SHGC-77813 (e-PCR)
- UniSTS:95962

AL033999 (e-PCR)
- UniSTS:93415

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables guanyl-nucleotide exchange factor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables phosphatidylinositol phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in T cell receptor signaling pathway	IEA Inferred from Electronic Annotation more info	PubMed
involved_in endocytic recycling	IEA Inferred from Electronic Annotation more info	PubMed
involved_in endocytosis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info	PubMed
located_in nuclear speck	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: DENN domain-containing protein 1B

Names: DENN/MADD domain containing 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

51332550..51590081

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063794083.1 → XP_063650153.1 DENN domain-containing protein 1B isoform X1
XM_063794087.1 → XP_063650157.1 DENN domain-containing protein 1B isoform X3
XM_063794102.1 → XP_063650172.1 DENN domain-containing protein 1B isoform X6
XM_063794107.1 → XP_063650177.1 DENN domain-containing protein 1B isoform X7
XM_063794115.1 → XP_063650185.1 DENN domain-containing protein 1B isoform X8
XM_063794100.1 → XP_063650170.1 DENN domain-containing protein 1B isoform X5
XM_063794085.1 → XP_063650155.1 DENN domain-containing protein 1B isoform X2

UniProtKB/TrEMBL

A0A2I3SMC2, A0A2J8KI03, A0A6D2Y616
XM_063794123.1 → XP_063650193.1 DENN domain-containing protein 1B isoform X9

UniProtKB/TrEMBL

A0A2J8KI08, A0A6D2X051, H2RBM1
XM_063794093.1 → XP_063650163.1 DENN domain-containing protein 1B isoform X4