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PRDX6 peroxiredoxin 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 469589, updated on 11-Oct-2018

Summary

Official Symbol
PRDX6provided by VGNC
Official Full Name
peroxiredoxin 6provided by VGNC
Primary source
VGNC:VGNC:57602
Locus tag
CK820_G0048981
See related
Ensembl:ENSPTRG00000042455
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See PRDX6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 1 NC_036879.1 (148584608..148596144)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 1 NC_006468.3 (151949303..151960774)

Chromosome 1 - NC_036879.1Genomic Context describing neighboring genes Neighboring gene TNF superfamily member 4 Neighboring gene small nucleolar RNA U13 Neighboring gene centrosomal protein of 57 kDa pseudogene Neighboring gene solute carrier family 9 member C2 (putative) Neighboring gene ankyrin repeat domain 45 Neighboring gene testis expressed 50

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036879.1 Reference Clint_PTRv2 Primary Assembly

    Range
    148584608..148596144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_524972.7XP_524972.2  peroxiredoxin-6

    See identical proteins and their annotated locations for XP_524972.2

    UniProtKB/TrEMBL
    H2RFX7
    Related
    ENSPTRP00000060423.1
    Conserved Domains (1) summary
    cd03016
    Location:7222
    PRX_1cys; Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by ...
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