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TNFRSF11A TNF receptor superfamily member 11a [ Pan troglodytes (chimpanzee) ]

Gene ID: 468560, updated on 3-Apr-2024

Summary

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Official Symbol
TNFRSF11Aprovided by VGNC
Official Full Name
TNF receptor superfamily member 11aprovided by VGNC
Primary source
VGNC:VGNC:5213
Locus tag
CK820_G0011306
See related
Ensembl:ENSPTRG00000010075
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See TNFRSF11A in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 17 NC_072415.2 (72372086..72433080)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 18 NC_072416.1 (71309548..71376568)

Chromosome 17 - NC_072415.2Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class N Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene actin, cytoplasmic 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lymph node development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mammary gland alveolus development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multinuclear osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to interleukin-1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 11A
Names
tumor necrosis factor receptor superfamily, member 11a, NFKB activator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072415.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    72372086..72433080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_523949.8 → XP_523949.3  tumor necrosis factor receptor superfamily member 11A isoform X1

  2. XM_003953292.5 → XP_003953341.1  tumor necrosis factor receptor superfamily member 11A isoform X4

    UniProtKB/TrEMBL
    A0A2I3RGN8, A0A2I3SCA0, A0A2J8NDA9, A0A2J8NDB5, A0A6D2WMY7, A0A6D2XXB5
    Related
    ENSPTRP00000063856.1
    Conserved Domains (1) summary
    cd13411
    Location:33 → 195
    TNFRSF11A; Tumor necrosis factor receptor superfamily member 11A (TNFRSF11A), also known as receptor activator of nuclear factor-kappaB (RANK)

  3. XM_016933830.4 → XP_016789319.2  tumor necrosis factor receptor superfamily member 11A isoform X2

  4. XM_016933832.4 → XP_016789321.2  tumor necrosis factor receptor superfamily member 11A isoform X3

Nucleotide Protein
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