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NOG noggin [ Pan troglodytes (chimpanzee) ]

Gene ID: 468413, updated on 29-Mar-2024

Summary

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Official Symbol
NOGprovided by VGNC
Official Full Name
nogginprovided by VGNC
Primary source
VGNC:VGNC:9602
Locus tag
CK820_G0020947
See related
Ensembl:ENSPTRG00000009430
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See NOG in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (69713035..69715006)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (67897490..67899457)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene phosphatidylcholine transfer protein Neighboring gene ankyrin repeat and fibronectin type III domain containing 1 Neighboring gene uncharacterized LOC129137736 Neighboring gene uncharacterized LOC107969082 Neighboring gene chromosome 17 C17orf67 homolog Neighboring gene diacylglycerol kinase epsilon

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dorsal/ventral pattern formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in osteoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
noggin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    69713035..69715006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_523802.8 → XP_523802.2  noggin

    See identical proteins and their annotated locations for XP_523802.2

    UniProtKB/TrEMBL
    A0A2J8MFG6, A0A6D2Y1N5, H2QDH3
    Related
    ENSPTRP00000016018.4
    Conserved Domains (1) summary
    pfam05806
    Location:12 → 232
    Noggin; Noggin
Nucleotide Protein
Heading Accession and Version

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