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KRT17 keratin 17 [ Pan troglodytes (chimpanzee) ]

Gene ID: 468261, updated on 27-Jun-2020

Summary

Official Symbol
KRT17provided by VGNC
Official Full Name
keratin 17provided by VGNC
Primary source
VGNC:VGNC:12354
Locus tag
CK820_G0039028
See related
Ensembl:ENSPTRG00000009173
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
K17; CK-17

Genomic context

See KRT17 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 17 NC_036896.1 (15163451..15168592)
104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 17 NC_006484.4 (16002142..16007283)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 17 NC_006484.3 (15773946..15779087)

Chromosome 17 - NC_036896.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1 Neighboring gene keratin, type I cytoskeletal 42-like Neighboring gene keratin 16 Neighboring gene keratin 14

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

General protein information

Preferred Names
keratin, type I cytoskeletal 17
Names
cytokeratin-17

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001144837.2NP_001138309.1  keratin, type I cytoskeletal 17

    See identical proteins and their annotated locations for NP_001138309.1

    Status: PROVISIONAL

    Source sequence(s)
    AB222148
    UniProtKB/Swiss-Prot
    A5A6M0
    Related
    ENSPTRP00000015625.5, ENSPTRT00000016881.6
    Conserved Domains (3) summary
    pfam00038
    Location:84394
    Filament; Intermediate filament protein
    cl03075
    Location:350403
    GrpE; nucleotide exchange factor GrpE
    cl14876
    Location:215296
    Zinc_peptidase_like; Zinc peptidases M18, M20, M28, and M42

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036896.1 Reference Clint_PTRv2 Primary Assembly

    Range
    15163451..15168592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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