U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CDADC1 cytidine and dCMP deaminase domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467357, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
CDADC1provided by VGNC
Official Full Name
cytidine and dCMP deaminase domain containing 1provided by VGNC
Primary source
VGNC:VGNC:13070
Locus tag
CK820_G0031628
See related
Ensembl:ENSPTRG00000005871
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 14 NC_072412.2 (54841389..54887109)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 13 NC_072411.1 (50208476..50253918)

Chromosome 14 - NC_072412.2Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase OGFOD1-like Neighboring gene uncharacterized LOC107968098 Neighboring gene motilin receptor Neighboring gene calcium binding protein 39 like Neighboring gene U6 spliceosomal RNA Neighboring gene SET domain bifurcated histone lysine methyltransferase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytidine and dCMP deaminase domain-containing protein 1
XP_016781203.1
XP_016781204.1
XP_522754.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072412.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    54841389..54887109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_522754.6 → XP_522754.1  cytidine and dCMP deaminase domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_522754.1

    UniProtKB/TrEMBL
    A0A2J8L8U7, A0A6D2VVH2, H2Q7K3, K7B8T4
    Related
    ENSPTRP00000009987.4
    Conserved Domains (2) summary
    cd01286
    Location:319 → 454
    deoxycytidylate_deaminase; Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the ...
    cl00269
    Location:79 → 151
    cytidine_deaminase-like; Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members ...

  2. XM_016925714.4 → XP_016781203.1  cytidine and dCMP deaminase domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    cd01286
    Location:319 → 454
    deoxycytidylate_deaminase; Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the ...
    cl00269
    Location:79 → 151
    cytidine_deaminase-like; Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members ...

  3. XM_016925715.4 → XP_016781204.1  cytidine and dCMP deaminase domain-containing protein 1 isoform X3

    Conserved Domains (2) summary
    cd01286
    Location:274 → 409
    deoxycytidylate_deaminase; Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the ...
    cl00269
    Location:34 → 106
    cytidine_deaminase-like; Cytidine and deoxycytidylate deaminase zinc-binding region. The family contains cytidine deaminases, nucleoside deaminases, deoxycytidylate deaminases and riboflavin deaminases. Also included are the apoBec family of mRNA editing enzymes. All members ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous