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APOF apolipoprotein F [ Pan troglodytes (chimpanzee) ]

Gene ID: 467203, updated on 29-Mar-2024

Summary

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Official Symbol
APOFprovided by VGNC
Official Full Name
apolipoprotein Fprovided by VGNC
Primary source
VGNC:VGNC:4927
Locus tag
CK820_G0046618
See related
Ensembl:ENSPTRG00000005096
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 10 NC_072408.2 (39652217..39654325)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (38325734..38327843)

Chromosome 10 - NC_072408.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134807529 Neighboring gene TBCC domain-containing protein 1-like Neighboring gene signal transducer and activator of transcription 2 Neighboring gene U7 small nuclear RNA Neighboring gene interleukin 23 subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apolipoprotein F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    39652217..39654325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_522601.8 → XP_522601.2  apolipoprotein F

    UniProtKB/TrEMBL
    A0A2I3TBZ3, A0A2J8Q1P6, A0A6D2WK60, H2Q689
    Related
    ENSPTRP00000008671.4
    Conserved Domains (1) summary
    pfam15148
    Location:63 → 260
    Apolipo_F; Apolipoprotein F
Nucleotide Protein
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