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WNT5B Wnt family member 5B [ Pan troglodytes (chimpanzee) ]

Gene ID: 467191, updated on 2-Nov-2023

Summary

Official Symbol
WNT5Bprovided by VGNC
Official Full Name
Wnt family member 5Bprovided by VGNC
Primary source
VGNC:VGNC:10084
Locus tag
CK820_G0037431
See related
Ensembl:ENSPTRG00000004519
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See WNT5B in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (7327330..7451277)

Chromosome 12 - NC_072410.1Genomic Context describing neighboring genes Neighboring gene ELKS/RAB6-interacting/CAST family member 1 Neighboring gene uncharacterized LOC107967815 Neighboring gene uncharacterized LOC107967816 Neighboring gene F-box and leucine rich repeat protein 14 Neighboring gene uncharacterized LOC107967401 Neighboring gene uncharacterized LOC129136497

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072410.1 Chromosome 12 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
protein Wnt-5b
Names
wingless-type MMTV integration site family, member 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072410.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    7327330..7451277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003952080.5XP_003952129.2  protein Wnt-5b isoform X1

    Conserved Domains (1) summary
    cd19348
    Location:69380
    Wnt_Wnt5b; Wnt domain found in protein Wnt-5b and similar proteins
  2. XM_009424600.4XP_009422875.1  protein Wnt-5b isoform X5

    See identical proteins and their annotated locations for XP_009422875.1

    UniProtKB/TrEMBL
    A0A2J8KMH0, A0A6D2Y9Z7, H2Q569
    Conserved Domains (1) summary
    cd19348
    Location:48359
    Wnt_Wnt5b; Wnt domain found in protein Wnt-5b and similar proteins
  3. XM_009424593.4XP_009422868.1  protein Wnt-5b isoform X2

    Conserved Domains (1) summary
    pfam00110
    Location:175480
    wnt; wnt family
  4. XM_009424594.4XP_009422869.1  protein Wnt-5b isoform X3

    Conserved Domains (1) summary
    pfam00110
    Location:164469
    wnt; wnt family
  5. XM_009424599.4XP_009422874.1  protein Wnt-5b isoform X5

    See identical proteins and their annotated locations for XP_009422874.1

    UniProtKB/TrEMBL
    A0A2J8KMH0, A0A6D2Y9Z7, H2Q569
    Conserved Domains (1) summary
    cd19348
    Location:48359
    Wnt_Wnt5b; Wnt domain found in protein Wnt-5b and similar proteins
  6. XM_009424595.4XP_009422870.1  protein Wnt-5b isoform X4

    Conserved Domains (1) summary
    cd19348
    Location:149460
    Wnt_Wnt5b; Wnt domain found in protein Wnt-5b and similar proteins
  7. XM_009424598.4XP_009422873.1  protein Wnt-5b isoform X5

    See identical proteins and their annotated locations for XP_009422873.1

    UniProtKB/TrEMBL
    A0A2J8KMH0, A0A6D2Y9Z7, H2Q569
    Related
    ENSPTRP00000007733.3
    Conserved Domains (1) summary
    cd19348
    Location:48359
    Wnt_Wnt5b; Wnt domain found in protein Wnt-5b and similar proteins