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TNFRSF1A TNF receptor superfamily member 1A [ Pan troglodytes (chimpanzee) ]

Gene ID: 466934, updated on 2-Nov-2023

Summary

Official Symbol
TNFRSF1Aprovided by VGNC
Official Full Name
TNF receptor superfamily member 1Aprovided by VGNC
Primary source
VGNC:VGNC:52079
Locus tag
CK820_G0048179
See related
Ensembl:ENSPTRG00000004570
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See TNFRSF1A in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 12 NC_072410.1 (12159439..12172775, complement)

Chromosome 12 - NC_072410.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107967418 Neighboring gene uncharacterized LOC107967417 Neighboring gene pleckstrin homology and RhoGEF domain containing G6 Neighboring gene sodium channel epithelial 1 subunit alpha Neighboring gene lymphotoxin beta receptor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072410.1 Chromosome 12 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
tumor necrosis factor receptor superfamily member 1A
Names
tumor necrosis factor receptor 1
tumor necrosis factor receptor superfamily, member 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072410.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    12159439..12172775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009424666.3XP_009422941.2  tumor necrosis factor receptor superfamily member 1A isoform X1

    UniProtKB/TrEMBL
    A0A2J8JF06, A0A6D2WZC8, K7BID5
  2. XM_054663988.1XP_054519963.1  tumor necrosis factor receptor superfamily member 1A isoform X2