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LOC466538 olfactory receptor 5L1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466538, updated on 29-Mar-2024

Summary

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Gene symbol
LOC466538
Gene description
olfactory receptor 5L1
Locus tag
CK820_G0030624
See related
Ensembl:ENSPTRG00000045812
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (58115981..58117088)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (57207828..57208935)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5D13-like Neighboring gene olfactory receptor family 5 subfamily D member 14 Neighboring gene olfactory receptor family 5 subfamily D member 18 Neighboring gene olfactory receptor family 5 subfamily L member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables odorant binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of smell IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
olfactory receptor 5L1
Names
OR5L2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    58115981..58117088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_521937.5 → XP_521937.3  olfactory receptor 5L1

    UniProtKB/TrEMBL
    A0A2J8LC04, A0A6D2XD15, H2R7U1
    Related
    ENSPTRP00000050812.2
    Conserved Domains (1) summary
    cd15410
    Location:12 → 305
    7tmA_OR5D-like; olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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