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NR1H3 nuclear receptor subfamily 1 group H member 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466507, updated on 2-Nov-2023

Summary

Official Symbol
NR1H3provided by VGNC
Official Full Name
nuclear receptor subfamily 1 group H member 3provided by VGNC
Primary source
VGNC:VGNC:3089
Locus tag
CK820_G0028898
See related
Ensembl:ENSPTRG00000003560
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
NR1H2; LXR-alpha
Orthologs
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Genomic context

See NR1H3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (51067015..51087169)

Chromosome 11 - NC_072409.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S20-like Neighboring gene damage specific DNA binding protein 2 Neighboring gene acid phosphatase 2, lysosomal Neighboring gene MAP kinase activating death domain Neighboring gene myosin binding protein C3

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072409.1 Chromosome 11 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General protein information

Preferred Names
oxysterols receptor LXR-alpha
XP_001168367.1
XP_009458620.1
XP_009458623.1
XP_009458624.1
XP_009458628.1
XP_009458632.1
XP_016776327.1
XP_016776328.1
XP_054517323.1
XP_054517324.1
XP_054517326.1
XP_521906.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072409.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    51067015..51087169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009460357.2XP_009458632.1  oxysterols receptor LXR-alpha isoform X8

    See identical proteins and their annotated locations for XP_009458632.1

    UniProtKB/TrEMBL
    A0A2I3SPS8, A0A2J8LH04, A0A6D2W0D7
    Related
    ENSPTRP00000079039.1, ENSPTRT00000105073.1
    Conserved Domains (2) summary
    cd06954
    Location:216451
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:84184
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  2. XM_009460349.3XP_009458624.1  oxysterols receptor LXR-alpha isoform X1

    See identical proteins and their annotated locations for XP_009458624.1

    UniProtKB/TrEMBL
    A0A2J8LH05, A0A6D2XX46, H2Q3I8, K7AUZ1
    Related
    ENSPTRP00000072725.1
    Conserved Domains (2) summary
    cd06954
    Location:210445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  3. XM_001168367.5XP_001168367.1  oxysterols receptor LXR-alpha isoform X2

    See identical proteins and their annotated locations for XP_001168367.1

    UniProtKB/TrEMBL
    A0A2J8LH01
    Conserved Domains (2) summary
    cd06954
    Location:165400
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:33133
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  4. XM_054661351.1XP_054517326.1  oxysterols receptor LXR-alpha isoform X7

  5. XM_054661348.1XP_054517323.1  oxysterols receptor LXR-alpha isoform X3

  6. XM_009460345.2XP_009458620.1  oxysterols receptor LXR-alpha isoform X1

    See identical proteins and their annotated locations for XP_009458620.1

    UniProtKB/TrEMBL
    A0A2J8LH05, A0A6D2XX46, H2Q3I8, K7AUZ1
    Conserved Domains (2) summary
    cd06954
    Location:210445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  7. XM_054661349.1XP_054517324.1  oxysterols receptor LXR-alpha isoform X5

  8. XM_016920838.3XP_016776327.1  oxysterols receptor LXR-alpha isoform X4

  9. XM_016920839.2XP_016776328.1  oxysterols receptor LXR-alpha isoform X6

    Conserved Domains (2) summary
    cd07160
    Location:78178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
    cl11397
    Location:210368
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
  10. XM_009460348.3XP_009458623.1  oxysterols receptor LXR-alpha isoform X1

    See identical proteins and their annotated locations for XP_009458623.1

    UniProtKB/TrEMBL
    A0A2J8LH05, A0A6D2XX46, H2Q3I8, K7AUZ1
    Related
    ENSPTRP00000006182.5
    Conserved Domains (2) summary
    cd06954
    Location:210445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  11. XM_521906.8XP_521906.1  oxysterols receptor LXR-alpha isoform X1

    See identical proteins and their annotated locations for XP_521906.1

    UniProtKB/TrEMBL
    A0A2J8LH05, A0A6D2XX46, H2Q3I8, K7AUZ1
    Conserved Domains (2) summary
    cd06954
    Location:210445
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:78178
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers
  12. XM_009460353.3XP_009458628.1  oxysterols receptor LXR-alpha isoform X2

    See identical proteins and their annotated locations for XP_009458628.1

    UniProtKB/TrEMBL
    A0A2J8LH01
    Conserved Domains (2) summary
    cd06954
    Location:165400
    NR_LBD_LXR; The ligand binding domain of Liver X receptors, a family of nuclear receptors of ligand-activated transcription factors
    cd07160
    Location:33133
    NR_DBD_LXR; DNA-binding domain of Liver X receptors (LXRs) family is composed of two C4-type zinc fingers