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CHST3 carbohydrate sulfotransferase 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466290, updated on 29-Mar-2024

Summary

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Official Symbol
CHST3provided by VGNC
Official Full Name
carbohydrate sulfotransferase 3provided by VGNC
Primary source
VGNC:VGNC:12282
Locus tag
CK820_G0007918
See related
Ensembl:ENSPTRG00000002607
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (84173222..84224990)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (74788218..74839526)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene cadherin related 23 Neighboring gene U7 small nuclear RNA Neighboring gene V-set immunoregulatory receptor Neighboring gene prosaposin Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene large ribosomal subunit protein eL15-like Neighboring gene small nucleolar RNA SNORA36 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3
Names
carbohydrate (chondroitin 6) sulfotransferase 3
XP_009456931.1
XP_009456932.1
XP_521690.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    84173222..84224990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009458656.5 → XP_009456931.1  carbohydrate sulfotransferase 3

    See identical proteins and their annotated locations for XP_009456931.1

    UniProtKB/TrEMBL
    A0A2J8NUQ3, A0A6D2WEB9, H2Q222
    Conserved Domains (1) summary
    pfam00685
    Location:265 → 452
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_009458657.5 → XP_009456932.1  carbohydrate sulfotransferase 3

    See identical proteins and their annotated locations for XP_009456932.1

    UniProtKB/TrEMBL
    A0A2J8NUQ3, A0A6D2WEB9, H2Q222
    Conserved Domains (1) summary
    pfam00685
    Location:265 → 452
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_521690.9 → XP_521690.1  carbohydrate sulfotransferase 3

    See identical proteins and their annotated locations for XP_521690.1

    UniProtKB/TrEMBL
    A0A2J8NUQ3, A0A6D2WEB9, H2Q222
    Related
    ENSPTRP00000004524.3
    Conserved Domains (1) summary
    pfam00685
    Location:265 → 452
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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