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ARMCX6 armadillo repeat containing X-linked 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465765, updated on 6-Oct-2018

Summary

Official Symbol
ARMCX6provided by VGNC
Official Full Name
armadillo repeat containing X-linked 6provided by VGNC
Primary source
VGNC:VGNC:12176
Locus tag
CK820_G0052810
See related
Ensembl:ENSPTRG00000028238
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan

Genomic context

See ARMCX6 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) X NC_036902.1 (97090258..97093159, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) X NC_006491.3 (101950557..101951704)

Chromosome X - NC_036902.1Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing X-linked 1 Neighboring gene protein kinase C iota type pseudogene Neighboring gene protein ARMCX6-like Neighboring gene U6 spliceosomal RNA Neighboring gene armadillo repeat containing X-linked 3

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036902.1 Reference Clint_PTRv2 Primary Assembly

    Range
    97090258..97093159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016943331.1XP_016798820.1  protein ARMCX6

    UniProtKB/TrEMBL
    K7C971
    Conserved Domains (1) summary
    pfam04826
    Location:123295
    Arm_2; Armadillo-like
  2. XM_521184.7XP_521184.3  protein ARMCX6

    See identical proteins and their annotated locations for XP_521184.3

    UniProtKB/TrEMBL
    K7C971
    Related
    ENSPTRP00000047334.4
    Conserved Domains (1) summary
    pfam04826
    Location:123295
    Arm_2; Armadillo-like
  3. XM_016943332.2XP_016798821.1  protein ARMCX6

    UniProtKB/TrEMBL
    K7C971
    Conserved Domains (1) summary
    pfam04826
    Location:123295
    Arm_2; Armadillo-like

RNA

  1. XR_001714029.1 RNA Sequence

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