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HSPA5 heat shock protein family A (Hsp70) member 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464733, updated on 6-Oct-2018

Summary

Official Symbol
HSPA5provided by VGNC
Official Full Name
heat shock protein family A (Hsp70) member 5provided by VGNC
Primary source
VGNC:VGNC:4760
Locus tag
CK820_G0012342
See related
Ensembl:ENSPTRG00000000563
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See HSPA5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 9 NC_036888.1 (97501030..97506169, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 9 NC_006476.3 (124327302..124332543, complement)

Chromosome 9 - NC_036888.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107976776 Neighboring gene Rab9 effector protein with kelch motifs Neighboring gene uncharacterized LOC112204403 Neighboring gene 40S ribosomal protein S10 pseudogene Neighboring gene GTPase activating protein and VPS9 domains 1

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Pathways from BioSystems

  • Antigen processing and presentation, organism-specific biosystem (from KEGG)
    Antigen processing and presentation, organism-specific biosystem
    Antigen processing and presentation
  • Antigen processing and presentation, conserved biosystem (from KEGG)
    Antigen processing and presentation, conserved biosystem
    Antigen processing and presentation
  • MAPK signaling pathway, organism-specific biosystem (from WikiPathways)
    MAPK signaling pathway, organism-specific biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
  • Prion diseases, organism-specific biosystem (from KEGG)
    Prion diseases, organism-specific biosystemPrion diseases, also termed transmissible spongiform encephalopathies (TSEs), are a group of fatal neurodegenerative diseases that affect humans and a number of other animal species. The etiology of ...
  • Prion diseases, conserved biosystem (from KEGG)
    Prion diseases, conserved biosystemPrion diseases, also termed transmissible spongiform encephalopathies (TSEs), are a group of fatal neurodegenerative diseases that affect humans and a number of other animal species. The etiology of ...
  • Protein export, organism-specific biosystem (from KEGG)
    Protein export, organism-specific biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
  • Protein export, conserved biosystem (from KEGG)
    Protein export, conserved biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
  • Protein processing in endoplasmic reticulum, organism-specific biosystem (from KEGG)
    Protein processing in endoplasmic reticulum, organism-specific biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
  • Protein processing in endoplasmic reticulum, conserved biosystem (from KEGG)
    Protein processing in endoplasmic reticulum, conserved biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
  • Thyroid hormone synthesis, organism-specific biosystem (from KEGG)
    Thyroid hormone synthesis, organism-specific biosystemThyroid hormones triiodothyronine (T3) and thyroxine (T4) are essential for normal development, growth and metabolic homeostasis in all vertebrates, and synthesized in the thyroid gland. The function...
  • Thyroid hormone synthesis, conserved biosystem (from KEGG)
    Thyroid hormone synthesis, conserved biosystemThyroid hormones triiodothyronine (T3) and thyroxine (T4) are essential for normal development, growth and metabolic homeostasis in all vertebrates, and synthesized in the thyroid gland. The function...

General gene information

Markers

Homology

General protein information

Preferred Names
78 kDa glucose-regulated protein; endoplasmic reticulum chaperone BiP
Names
heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036888.1 Reference Clint_PTRv2 Primary Assembly

    Range
    97501030..97506169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_520257.6XP_520257.2  endoplasmic reticulum chaperone BiP

    See identical proteins and their annotated locations for XP_520257.2

    UniProtKB/TrEMBL
    H2PYQ3
    Related
    ENSPTRP00000000984.3
    Conserved Domains (1) summary
    pfam00012
    Location:30635
    HSP70; Hsp70 protein
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