U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SQLE squalene epoxidase [ Pan troglodytes (chimpanzee) ]

Gene ID: 464383, updated on 12-Apr-2023

Summary

Go to the top of the page Help
Official Symbol
SQLEprovided by VGNC
Official Full Name
squalene epoxidaseprovided by VGNC
Primary source
VGNC:VGNC:789
Locus tag
CK820_G0002291
See related
Ensembl:ENSPTRG00000020572
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SQLE in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (139922320..139946197)

Chromosome 8 - NC_072406.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 572 Neighboring gene uncharacterized LOC107976438 Neighboring gene WASH complex subunit 5 Neighboring gene NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_072406.1 Chromosome 8 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
squalene monooxygenase
XP_009454171.1
XP_009454172.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072406.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    139922320..139946197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009455896.4 → XP_009454171.1  squalene monooxygenase isoform X1

    See identical proteins and their annotated locations for XP_009454171.1

    UniProtKB/TrEMBL
    A0A2J8PNQ9, A0A6D2VWZ7, H2QWP8
    Related
    ENSPTRP00000035180.3
    Conserved Domains (2) summary
    cl21454
    Location:277 → 548
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl27552
    Location:122 → 427
    FAD_binding_3; FAD binding domain

  2. XM_009455897.4 → XP_009454172.1  squalene monooxygenase isoform X2

    Related
    ENSPTRP00000084867.1
    Conserved Domains (3) summary
    COG0654
    Location:67 → 441
    UbiH; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]
    pfam08491
    Location:219 → 490
    SE; Squalene epoxidase
    cl21454
    Location:68 → 117
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous