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GTF2E2 general transcription factor IIE subunit 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464098, updated on 12-Apr-2023

Summary

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Official Symbol
GTF2E2provided by VGNC
Official Full Name
general transcription factor IIE subunit 2provided by VGNC
Primary source
VGNC:VGNC:6675
Locus tag
CK820_G0013225
See related
Ensembl:ENSPTRG00000022529
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See GTF2E2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (42533358..42613128, complement)

Chromosome 8 - NC_072406.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112204181 Neighboring gene RNA binding protein, mRNA processing factor Neighboring gene uncharacterized LOC129135684 Neighboring gene U5 spliceosomal RNA Neighboring gene small integral membrane protein 18 Neighboring gene glutathione-disulfide reductase Neighboring gene UBX domain protein 8 Neighboring gene protein phosphatase 2 catalytic subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072406.1 Chromosome 8 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
transcription initiation factor IIE subunit beta
Names
general transcription factor IIE, polypeptide 2, beta 34kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072406.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    42533358..42613128 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001168104.3 → XP_001168104.1  transcription initiation factor IIE subunit beta

    See identical proteins and their annotated locations for XP_001168104.1

    UniProtKB/TrEMBL
    A0A2J8N887, A0A2R9AHX4, A0A6D2XXH3, H2QZJ1
    Related
    ENSPTRP00000039088.2
    Conserved Domains (2) summary
    cd07977
    Location:68 → 146
    TFIIE_beta_winged_helix; TFIIE_beta_winged_helix domain, located at the central core region of TFIIE beta, with double-stranded DNA binding activity
    pfam18121
    Location:146 → 204
    TFA2_Winged_2; TFA2 Winged helix domain 2

RNA

  1. XR_008536679.1 RNA Sequence

  2. XR_008536681.1 RNA Sequence

  3. XR_008536680.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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