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ELP3 elongator acetyltransferase complex subunit 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464081, updated on 6-Oct-2018

Summary

Official Symbol
ELP3provided by VGNC
Official Full Name
elongator acetyltransferase complex subunit 3provided by VGNC
Primary source
VGNC:VGNC:883
Locus tag
CK820_G0013288
See related
Ensembl:ENSPTRG00000020115
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs

Genomic context

See ELP3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 8 NC_036887.1 (27968456..28068731)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 8 NC_006475.3 (24401734..24500940)

Chromosome 8 - NC_036887.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor class A member 5 Neighboring gene nuclear GTPase, germinal center associated Neighboring gene PDZ and LIM domain protein 7 pseudogene Neighboring gene 60S ribosomal protein L5 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
  • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
  • BioProject: PRJNA271912
  • Publication: PMID 25392405
  • Analysis date: Tue Apr 3 07:13:10 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

General protein information

Preferred Names
elongator complex protein 3
Names
elongation protein 3 homolog
XP_001165532.1
XP_009453362.1
XP_009453363.1
XP_009453364.1
XP_009453365.1
XP_009453366.1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036887.1 Reference Clint_PTRv2 Primary Assembly

    Range
    27968456..28068731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001165532.4XP_001165532.1  elongator complex protein 3 isoform X1

    See identical proteins and their annotated locations for XP_001165532.1

    UniProtKB/TrEMBL
    H2QVY7
    Related
    ENSPTRP00000072314.1
    Conserved Domains (1) summary
    cl25699
    Location:36546
    Radical_SAM_C; Radical_SAM C-terminal domain
  2. XM_009455088.3XP_009453363.1  elongator complex protein 3 isoform X2

    See identical proteins and their annotated locations for XP_009453363.1

    Conserved Domains (1) summary
    cl25699
    Location:1454
    Radical_SAM_C; Radical_SAM C-terminal domain
  3. XM_009455090.3XP_009453365.1  elongator complex protein 3 isoform X3

    See identical proteins and their annotated locations for XP_009453365.1

    Conserved Domains (1) summary
    COG1243
    Location:13427
    ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
  4. XM_009455091.3XP_009453366.1  elongator complex protein 3 isoform X3

    See identical proteins and their annotated locations for XP_009453366.1

    Conserved Domains (1) summary
    COG1243
    Location:13427
    ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
  5. XM_009455087.3XP_009453362.1  elongator complex protein 3 isoform X2

    See identical proteins and their annotated locations for XP_009453362.1

    Conserved Domains (1) summary
    cl25699
    Location:1454
    Radical_SAM_C; Radical_SAM C-terminal domain
  6. XM_009455089.3XP_009453364.1  elongator complex protein 3 isoform X3

    See identical proteins and their annotated locations for XP_009453364.1

    Related
    ENSPTRP00000034434.5
    Conserved Domains (1) summary
    COG1243
    Location:13427
    ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
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