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MSR1 macrophage scavenger receptor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464003, updated on 23-Mar-2018
Official Symbol
MSR1provided by VGNC
Official Full Name
macrophage scavenger receptor 1provided by VGNC
Primary source
VGNC:VGNC:14634
See related
Ensembl:ENSPTRG00000020013
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
105 current Clint_PTRv2 (GCF_002880755.1) 8 NC_036887.1 (15903164..15988043, complement)
103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 8 NC_006475.3 (12139411..12287538, complement)

Chromosome 8 - NC_036887.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1A pseudogene Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene uncharacterized LOC107976248 Neighboring gene fibroblast growth factor 20

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Phagosome, organism-specific biosystem (from KEGG)
    Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
  • Phagosome, conserved biosystem (from KEGG)
    Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...

Markers

Homology

Preferred Names
macrophage scavenger receptor types I and II

RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clint_PTRv2 Primary Assembly

Genomic

  1. NC_036887.1 Reference Clint_PTRv2 Primary Assembly

    Range
    15903164..15988043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016959120.1XP_016814609.1  macrophage scavenger receptor types I and II isoform X1

    Related
    ENSPTRP00000070959.1, ENSPTRT00000076921.1
    Conserved Domains (4) summary
    pfam01391
    Location:280334
    Collagen; Collagen triple helix repeat (20 copies)
    smart00202
    Location:350450
    SR; Scavenger receptor Cys-rich
    pfam03523
    Location:121169
    Macscav_rec; Macrophage scavenger receptor
    cl26252
    Location:104269
    AAA_13; AAA domain
  2. XM_016959121.2XP_016814610.1  macrophage scavenger receptor types I and II isoform X1

    Related
    ENSPTRP00000078656.1
    Conserved Domains (4) summary
    pfam01391
    Location:280334
    Collagen; Collagen triple helix repeat (20 copies)
    smart00202
    Location:350450
    SR; Scavenger receptor Cys-rich
    pfam03523
    Location:121169
    Macscav_rec; Macrophage scavenger receptor
    cl26252
    Location:104269
    AAA_13; AAA domain
  3. XM_016959122.2XP_016814611.1  macrophage scavenger receptor types I and II isoform X2

    Related
    ENSPTRP00000075288.1
    Conserved Domains (3) summary
    pfam01391
    Location:280334
    Collagen; Collagen triple helix repeat (20 copies)
    pfam03523
    Location:121169
    Macscav_rec; Macrophage scavenger receptor
    cl26252
    Location:104269
    AAA_13; AAA domain
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